RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 LRRC23Q53EV4 343 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 TSPO2Q5TGU0 170 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 FAM91A1Q658Y4 838 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 WDR88Q6ZMY6 472 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 AAED1Q7RTV5 226 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC15A3Q8IY34 581 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 ZNF433Q8N7K0 673 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 OR2T12Q8NG77 320 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 ZNF417Q8TAU3 575 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC38A4Q969I6 547 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 ZNF587Q96SQ5 575 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 HDHD5Q9BXW7 423 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 NSRP1Q9H0G5 558 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 C12orf10Q9HB07 376 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC7A10Q9NS82 523 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 SH3GLB1Q9Y371 365 aa13.09□□□□□ -0.31
RABGGTA-211ENST00000559850 TRAV36DV7A0A075B6V5 113 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 A0A087WUJ7 227 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 NME4O00746 187 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 GOSR1O95249 250 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 LYPD3O95274 346 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 RAF1P04049 648 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 C8BP07358 591 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 ITGA5P08648 1049 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 COX5AP20674 150 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 DNASE1P24855 282 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 OR1E2P47887 323 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 SELENOPP49908 381 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 SLC7A2P52569 658 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 IL1RL1Q01638 556 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 LIPEQ05469 1076 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 TESK1Q15569 626 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 BEX5Q5H9J7 111 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 ERICH5Q6P6B1 374 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 SEZ6L2Q6UXD5 910 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 CREB3L2Q70SY1 520 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 CARM1Q86X55 608 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 EPHX4Q8IUS5 362 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 MICU2Q8IYU8 434 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 C10orf53Q8N6V4 93 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 MOGAT1Q96PD6 335 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 SF3B5Q9BWJ5 86 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 ASB6Q9NWX5 421 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 SLC7A7Q9UM01 511 aa13.08□□□□□ -0.32
RABGGTA-211ENST00000559850 CCDC168Q8NDH2 2452 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 CIB4A0PJX0 185 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 KPNA4O00629 521 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 HPRP00739 348 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 BGLAPP02818 100 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 CDH2P19022 906 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 GGT1P19440 569 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 CLDN17P56750 224 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 VEZF1Q14119 521 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 KEAP1Q14145 624 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 CYBRD1Q53TN4 286 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 FAM69AQ5T7M9 428 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 C8orf82Q6P1X6 216 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 NIPAL3Q6P499 406 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 ZNF613Q6PF04 617 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 ADAMTS16Q8TE57 1224 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 PROX1Q92786 737 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 TMEM45BQ96B21 275 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 TPD52L3Q96J77 140 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 OR10A4Q9H209 315 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 EFCAB1Q9HAE3 211 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 NPAP1Q9NZP6 1156 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 B3GAT1Q9P2W7 334 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 UPB1Q9UBR1 384 aa13.07□□□□□ -0.32
RABGGTA-211ENST00000559850 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 DYNC1I1O14576 645 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 CHP2O43745 196 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 FMO6PO60774 539 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 UPK3AO75631 287 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 KDELR2P33947 212 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 GSK3BP49841 420 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 PPA1Q15181 289 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 LINC00114Q6XXX2 140 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 DEF8Q6ZN54 512 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 ZNF704Q6ZNC4 412 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 LINGO2Q7L985 606 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 HSD17B8Q92506 261 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 NEUROG1Q92886 237 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 NINJ1Q92982 152 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 C1QTNF6Q9BXI9 259 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 SLCO5A1Q9H2Y9 848 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 EVA1AQ9H8M9 152 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 PARPBPQ9NWS1 579 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 MALT1Q9UDY8 824 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
RABGGTA-211ENST00000559850 DSCAMO60469 2012 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 TRAPPC13A5PLN9 417 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 DPRXA6NFQ7 191 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 OR5H1A6NKK0 313 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 PDLIM1O00151 329 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 CLOCKO15516 846 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 OR2T1O43869 369 aa13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-211ENST00000559850 HLA-DOBP13765 273 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms