RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 HMGN2P46Q86SG4 172 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 ADGRG3Q86Y34 549 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 CCDC103Q8IW40 242 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 ZNF525Q8N782 197 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 TOR1AIP2Q8NFQ8 470 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 AGR3Q8TD06 166 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 MIPOL1Q8TD10 442 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 ST8SIA1Q92185 356 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 DNAJA3Q96EY1 480 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 REXO5Q96IC2 774 aaKnown RBP5.08□□□□□ -1.6
USP3-215ENST00000559771 MUS81Q96NY9 551 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 OR5B2Q96R09 309 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 TNFRSF13CQ96RJ3 184 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 DUSP26Q9BV47 211 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 CACNG6Q9BXT2 260 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 AMBRA1Q9C0C7 1298 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 BHLHE41Q9C0J9 482 aaPredicted RBP5.08□□□□□ -1.6
USP3-215ENST00000559771 OR11A1Q9GZK7 315 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 VCX3BQ9H321 246 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 DENND2DQ9H6A0 471 aaPredicted RBP5.08□□□□□ -1.6
USP3-215ENST00000559771 EML4Q9HC35 981 aaKnown RBP5.08□□□□□ -1.6
USP3-215ENST00000559771 NGBQ9NPG2 151 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 CTPS2Q9NRF8 586 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 ACER3Q9NUN7 267 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 ARL8BQ9NVJ2 186 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 MALT1Q9UDY8 824 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 MKLN1Q9UL63 735 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 FAF1Q9UNN5 650 aaPredicted RBP5.08□□□□□ -1.6
USP3-215ENST00000559771 PLCE1Q9P212 2302 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 ALPK2Q86TB3 2170 aa5.08□□□□□ -1.6
USP3-215ENST00000559771 ARFGEF3Q5TH69 2177 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 VWC2LB2RUY7 222 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 H3BNH8 94 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 H7C417 338 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 SULT2B1O00204 365 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 AP3D1O14617 1153 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 ITM2AO43736 263 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 KIAA0513O60268 411 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 STX11O75558 287 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 SKAP2O75563 359 aaPredicted RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 LYPLA1O75608 230 aaPredicted RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 PMS2P2O95744 297 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 CHEK2O96017 543 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 GUSBP08236 651 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 UBTFL6P0CB48 400 aaPredicted RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 FAM157CP0CG43 387 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 IGHV4-31P0DP07 118 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 IMPDH2P12268 514 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 ACADSP16219 412 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 DDX5P17844 614 aaKnown RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 PRPS1L1P21108 318 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 MATN1P21941 496 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 CD40P25942 277 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 SLC7A1P30825 629 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 RPL3P39023 403 aaKnown RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 VHLP40337 213 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 ZNF83P51522 516 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 CCR4P51679 360 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 SLC16A1P53985 500 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 CLDN8P56748 225 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 ACTR3P61158 418 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 VLDLRP98155 873 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 SRSF2Q01130 221 aaKnown RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 SLC34A1Q06495 639 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 LOXL1Q08397 574 aaPredicted RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 MERTKQ12866 999 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 SF3A3Q12874 501 aaKnown RBP eCLIP5.07□□□□□ -1.6
USP3-215ENST00000559771 MAPK11Q15759 364 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 NRF1Q16656 503 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 KRTAP24-1Q3LI83 254 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 LSM12Q3MHD2 195 aaKnown RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 AGAP6Q5VW22 663 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 OR4F3Q6IEY1 312 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 PODNL1Q6PEZ8 512 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 FRRS1Q6ZNA5 592 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 GALNT5Q7Z7M9 940 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 P2RY8Q86VZ1 359 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 TMCO5AQ8N6Q1 288 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 ARIH2OSQ8N7S6 290 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 ZNF614Q8N883 585 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 ZIC4Q8N9L1 334 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 FNDC5Q8NAU1 212 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 OR52E4Q8NGH9 312 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 OR52N5Q8NH56 324 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 RP9Q8TA86 221 aaKnown RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 C10orf105Q8TEF2 133 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 RAB8BQ92930 207 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 MOAP1Q96BY2 351 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 THOC1Q96FV9 657 aaKnown RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 PPP3R2Q96LZ3 170 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 HS6ST2Q96MM7 605 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 SORT1Q99523 831 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 DHRS9Q9BPW9 319 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 C1QTNF6Q9BXI9 259 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 C20orf27Q9GZN8 174 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 OR51I1Q9H343 314 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 BARX1Q9HBU1 254 aaPredicted RBP5.07□□□□□ -1.6
USP3-215ENST00000559771 CBLN4Q9NTU7 201 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 ASIC5Q9NY37 505 aa5.07□□□□□ -1.6
USP3-215ENST00000559771 PRPF19Q9UMS4 504 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms