RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 AK1P00568 194 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 SCG5P05408 212 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 HEXAP06865 529 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 IDH2P48735 452 aaKnown RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 PCYT1AP49585 367 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ZNF83P51522 516 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 CLNS1AP54105 237 aaKnown RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 OR2B6P58173 313 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 UFM1P61960 85 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 PHC1P78364 1004 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 PPP2R2BQ00005 443 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 BSPH1Q075Z2 132 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 BST1Q10588 318 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 FUT5Q11128 374 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 TOP3AQ13472 1001 aaPredicted RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 NFYCQ13952 458 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ZNF141Q15928 474 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ANXA8L1Q5VT79 327 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 TYW3Q6IPR3 259 aaKnown RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 FRRS1Q6ZNA5 592 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ZNF621Q6ZSS3 439 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 GABRG1Q8N1C3 465 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 LRRC75A-AS1Q8N1F1 130 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 SLC43A2Q8N370 569 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ARFGAP2Q8N6H7 521 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ANKFN1Q8N957 763 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 OR52N5Q8NH56 324 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 CNOT9Q92600 299 aaKnown RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 FBXW5Q969U6 566 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ZHX1-C8orf76Q96EF9 292 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 TEX37Q96LM6 180 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ZIM3Q96PE6 472 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 OR52E6Q96RD3 313 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 PANX1Q96RD7 426 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ZBTB18Q99592 522 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 PSD2Q9BQI7 771 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 INPP5KQ9BT40 448 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 C1QTNF6Q9BXI9 259 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 POTEKPQ9BYX7 375 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 NMUR2Q9GZQ4 415 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ZNF350Q9GZX5 532 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ESRP2Q9H6T0 727 aaKnown RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 WDR55Q9H6Y2 383 aaPredicted RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 NGBQ9NPG2 151 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 ASIC5Q9NY37 505 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 POU2F3Q9UKI9 436 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 RAI1Q7Z5J4 1906 aaPredicted RBP6.46□□□□□ -1.37
SPG11-213ENST00000558988 CCDC154A6NI56 674 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 FAM171A2A8MVW0 826 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 ZNF814B7Z6K7 855 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 INAFM1C9JVW0 142 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 SDHDO14521 159 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 AP3D1O14617 1153 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CYTIPO60759 359 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 RAMP1O60894 148 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 SCN2BO60939 215 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 AGR2O95994 175 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CHRM4P08173 479 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 SOD3P08294 240 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 ALDOCP09972 364 aaKnown RBP6.46□□□□□ -1.38
SPG11-213ENST00000558988 NR2F1P10589 423 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CDH2P19022 906 aaPredicted RBP6.46□□□□□ -1.38
SPG11-213ENST00000558988 IGHV1-2P23083 117 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 EPHA3P29320 983 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 IL12AP29459 219 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 PGM1P36871 562 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CDKN2CP42773 168 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 OR3A2P47893 321 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 GYS2P54840 703 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CSNK2A1P68400 391 aaPredicted RBP6.46□□□□□ -1.38
SPG11-213ENST00000558988 KCNJ10P78508 379 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 ITGADQ13349 1161 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 TNK1Q13470 666 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CASP8Q14790 479 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 P2RY6Q15077 328 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 PPA1Q15181 289 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 SYPL1Q16563 259 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CLEC12BQ2HXU8 276 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 NCMAPQ5T1S8 102 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 SAXO2Q658L1 398 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CASP12Q6UXS9 341 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 Q6ZT83 130 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 GALNT5Q7Z7M9 940 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CADM2Q8N3J6 435 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 MREGQ8N565 214 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 ZNF611Q8N823 705 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 OR8J2Q8NGG1 315 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 SLC25A43Q8WUT9 341 aaPredicted RBP6.46□□□□□ -1.38
SPG11-213ENST00000558988 ST8SIA1Q92185 356 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 HSD17B8Q92506 261 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 HTRA1Q92743 480 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 APH1AQ96BI3 265 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 TESCQ96BS2 214 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 MUCL1Q96DR8 90 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 NEURL3Q96EH8 262 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 C1orf159Q96HA4 380 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 ARL5BQ96KC2 179 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 CCDC140Q96MF4 163 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 TMEM109Q9BVC6 243 aa6.46□□□□□ -1.38
SPG11-213ENST00000558988 HDHD5Q9BXW7 423 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms