RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 ZBTB9Q96C00 473 aa19.18■□□□□ 0.66
SPG21-205ENST00000558339 FOXN4Q96NZ1 517 aa19.18■□□□□ 0.66
SPG21-205ENST00000558339 PIMREGQ9BSJ6 248 aa19.18■□□□□ 0.66
SPG21-205ENST00000558339 KATNB1Q9BVA0 655 aa19.18■□□□□ 0.66
SPG21-205ENST00000558339 TAPBPLQ9BX59 468 aa19.18■□□□□ 0.66
SPG21-205ENST00000558339 CHODLQ9H9P2 273 aa19.18■□□□□ 0.66
SPG21-205ENST00000558339 CRNNQ9UBG3 495 aaPredicted RBP19.18■□□□□ 0.66
SPG21-205ENST00000558339 P2RX2Q9UBL9 471 aa19.18■□□□□ 0.66
SPG21-205ENST00000558339 ZNF443Q9Y2A4 671 aaPredicted RBP19.18■□□□□ 0.66
SPG21-205ENST00000558339 FKBP7Q9Y680 259 aa19.18■□□□□ 0.66
SPG21-205ENST00000558339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.17■□□□□ 0.66
SPG21-205ENST00000558339 TMEM229AB2RXF0 380 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 RFXANKO14593 260 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 UPK3AO75631 287 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 KRT75O95678 551 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 TFPTP0C1Z6 253 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 EPHA3P29320 983 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 CALCRP30988 508 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 THBS2P35442 1172 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 SERPINF1P36955 418 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 SNRPD2P62316 118 aaKnown RBP19.17■□□□□ 0.66
SPG21-205ENST00000558339 LRRC74AQ0VAA2 488 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 ADIPOQQ15848 244 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 RPS26P11Q5JNZ5 115 aaPredicted RBP19.17■□□□□ 0.66
SPG21-205ENST00000558339 RNF220Q5VTB9 566 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 C1orf140Q5VVS0 124 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 C3orf49Q96BT1 292 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 PRDM4Q9UKN5 801 aa19.17■□□□□ 0.66
SPG21-205ENST00000558339 NBEAL1Q6ZS30 2694 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 ARPC4-TTLL3A0A0A6YYG9 625 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 LOC100289279A0A1B0GTE1 492 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 FTCDNL1E5RQL4 147 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 ZNF587BE7ETH6 402 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 KRT33AO76009 404 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 VAMP5O95183 116 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 IGLV1-44P01699 117 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 BCHEP06276 602 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 CECR9P0C854 216 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 NAAAQ02083 359 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 GTDC1Q4AE62 458 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 FAM120AOSQ5T036 256 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 FAM166AQ6J272 317 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 NIPAL3Q6P499 406 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 ANKRD16Q6P6B7 361 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 MAGEE2Q8TD90 523 aaPredicted RBP19.16■□□□□ 0.66
SPG21-205ENST00000558339 SLC38A5Q8WUX1 472 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 VRK1Q99986 396 aaPredicted RBP19.16■□□□□ 0.66
SPG21-205ENST00000558339 PTDSS2Q9BVG9 487 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 KCNS2Q9ULS6 477 aa19.16■□□□□ 0.66
SPG21-205ENST00000558339 A0A096LPE4 126 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 A0A1W2PPZ6 126 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 B9A039 149 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 CRYAAP02489 173 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 OR4A8P0C604 315 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 APEHP13798 732 aaKnown RBP19.15■□□□□ 0.66
SPG21-205ENST00000558339 SRD5A1P18405 259 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 CRISP3P54108 245 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 EFNB3Q15768 340 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 CARTPTQ16568 116 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 PRAMEF8Q5VWM4 474 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 PRAMEF7Q5VXH5 474 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 SLC46A3Q7Z3Q1 461 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 SERPINA11Q86U17 422 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 MYPOPQ86VE0 399 aaPredicted RBP19.15■□□□□ 0.66
SPG21-205ENST00000558339 KDM8Q8N371 416 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 GLB1L3Q8NCI6 653 aaPredicted RBP19.15■□□□□ 0.66
SPG21-205ENST00000558339 TRIM44Q96DX7 344 aaPredicted RBP19.15■□□□□ 0.66
SPG21-205ENST00000558339 TMEM19Q96HH6 336 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 ZBTB18Q99592 522 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 SOX7Q9BT81 388 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 LINC00470Q9BZP3 86 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 PLK3Q9H4B4 646 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 KCNK9Q9NPC2 374 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 SEC14L4Q9UDX3 406 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.15■□□□□ 0.66
SPG21-205ENST00000558339 RASD1Q9Y272 281 aa19.15■□□□□ 0.66
SPG21-205ENST00000558339 V9GYY5 206 aaPredicted RBP19.15■□□□□ 0.66
SPG21-205ENST00000558339 LOC390937A0A1W2PQ73 354 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 PDE5AO76074 875 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 PNMTP11086 282 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 CRATP43155 626 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 DSTNP60981 165 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 UBE2NP61088 152 aaKnown RBP19.14■□□□□ 0.65
SPG21-205ENST00000558339 COPZ1P61923 177 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 HGFACQ04756 655 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 EGR4Q05215 589 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 C3orf36Q3SXR2 165 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 VHLLQ6RSH7 139 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 STK35Q8TDR2 534 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 VPS33AQ96AX1 596 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 KCNS3Q9BQ31 491 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 C19orf24Q9BVV8 132 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 SPATA9Q9BWV2 254 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 BPESC1Q9GZL8 116 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 TPT1P8Q9HAU6 139 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 CALML5Q9NZT1 146 aa19.14■□□□□ 0.65
SPG21-205ENST00000558339 OR6C65A6NJZ3 312 aa19.13■□□□□ 0.65
SPG21-205ENST00000558339 HDAC3O15379 428 aa19.13■□□□□ 0.65
SPG21-205ENST00000558339 ZNF432O94892 652 aa19.13■□□□□ 0.65
SPG21-205ENST00000558339 IGKV3-15P01624 115 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms