RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 KRTAP24-1Q3LI83 254 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 CARD16Q5EG05 197 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TMEM53Q6P2H8 277 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 CCDC137Q6PK04 289 aaKnown RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TMUB2Q71RG4 321 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 PGAP1Q75T13 922 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TRMT10CQ7L0Y3 403 aaKnown RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 NIPA1Q7RTP0 329 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TIPARPQ7Z3E1 657 aaKnown RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 C9orf40Q8IXQ3 194 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 C12orf56Q8IXR9 622 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 OR4F6Q8NGB9 312 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 PAQR8Q8TEZ7 354 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TCTEX1D2Q8WW35 142 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 ITLN1Q8WWA0 313 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 HTR3CQ8WXA8 447 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 OR1E3Q8WZA6 343 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 PPP1R16AQ96I34 528 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 NOL4LQ96MY1 436 aaPredicted RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 DUX3Q96PT4 197 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TRNT1Q96Q11 434 aaKnown RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 MCCC1Q96RQ3 725 aaPredicted RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 CNN2Q99439 309 aaKnown RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 OPRPNQ99935 248 aaPredicted RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 KCNS3Q9BQ31 491 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 C20orf24Q9BUV8 137 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 CHIAQ9BZP6 476 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 ZBP1Q9H171 429 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 REEP4Q9H6H4 257 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 SMYD3Q9H7B4 428 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TREM1Q9NP99 234 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 IL26Q9NPH9 171 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 IMPAD1Q9NX62 359 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 WWOXQ9NZC7 414 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 PTTG3PQ9NZH4 202 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 SPRR3Q9UBC9 169 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TBC1D24Q9ULP9 559 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TMCO1Q9UM00 188 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 KCNIP3Q9Y2W7 256 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 CBY1Q9Y3M2 126 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 BZW2Q9Y6E2 419 aaKnown RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 ERCC6Q03468 1493 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 BAZ1BQ9UIG0 1483 aaKnown RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 PBRM1Q86U86 1689 aa2.49□□□□□ -2.01
TRAV28-201ENST00000557548 TARBP1Q13395 1621 aaKnown RBP2.49□□□□□ -2.01
TRAV28-201ENST00000557548 URB2Q14146 1524 aaKnown RBP2.48□□□□□ -2.01
TRAV28-201ENST00000557548 SH3TC1Q8TE82 1336 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 IGHV3OR16-10A0A075B7F0 116 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 A0A087WYN8 130 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 TUBAL3A6NHL2 446 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 SHISA9B4DS77 424 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 B4DXG7 233 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 PRSS44E7EML9 344 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 E9PAM4 449 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 GOLGA8TH3BQL2 631 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 GFYI3L273 518 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 ZNF701M0R085 212 aaPredicted RBP2.48□□□□□ -2.01
TRAV28-201ENST00000557548 TRDMT1O14717 391 aaKnown RBP2.48□□□□□ -2.01
TRAV28-201ENST00000557548 HSD17B6O14756 317 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 POLR1CO15160 346 aaPredicted RBP2.48□□□□□ -2.01
TRAV28-201ENST00000557548 HCN1O60741 890 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 TOM1O60784 492 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 KLHL2O95198 593 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 VENTXO95231 258 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 RENP00797 406 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 PIGRP01833 764 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 STAG3L2P0CL84 134 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 PTNP21246 168 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 IGHV1-2P23083 117 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 ADORA2BP29275 332 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 IL2RGP31785 369 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 ATP5C1P36542 298 aaKnown RBP2.48□□□□□ -2.01
TRAV28-201ENST00000557548 ELK3P41970 407 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 HAAOP46952 286 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 RPL29P47914 159 aaKnown RBP2.48□□□□□ -2.01
TRAV28-201ENST00000557548 EFNA3P52797 238 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 IST1P53990 364 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 CLDN8P56748 225 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 YWHAEP62258 255 aaKnown RBP2.48□□□□□ -2.01
TRAV28-201ENST00000557548 SCRN3Q0VDG4 424 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 ILKQ13418 452 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 XRCC4Q13426 336 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 OXA1LQ15070 435 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 OR2G6Q5TZ20 316 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 AGBL2Q5U5Z8 902 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 SLC22A10Q63ZE4 541 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 OR52E8Q6IFG1 317 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 TMEM220Q6QAJ8 160 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 LRRC74BQ6ZQY2 392 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 NUDCD3Q8IVD9 361 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 ABHD12Q8N2K0 398 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 TPRX1Q8N7U7 411 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 OR7G2Q8NG99 324 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 OR4C5Q8NGB2 326 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 OR56B4Q8NH76 319 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 ZPLD1Q8TCW7 415 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 VN1R17PQ8TDU5 208 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 ASZ1Q8WWH4 475 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 NRGNQ92686 78 aa2.48□□□□□ -2.01
TRAV28-201ENST00000557548 KIFAP3Q92845 792 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms