RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MAPK14Q16539 360 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 GSTA3Q16772 222 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 MST1LQ2TV78 715 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 PGS1Q32NB8 556 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 ANXA8L1Q5VT79 327 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 LIPNQ5VXI9 398 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 TYW3Q6IPR3 259 aaKnown RBP7.56□□□□□ -1.2
VRK1-206ENST00000557222 EMBQ6PCB8 327 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 CASP12Q6UXS9 341 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 CCDC103Q8IW40 242 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 LRRC34Q8IZ02 419 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 C4orf33Q8N1A6 199 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 FAM169BQ8N8A8 192 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 OR52E4Q8NGH9 312 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 KIF18AQ8NI77 898 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 ROPN1LQ96C74 230 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 TUBGCP3Q96CW5 907 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 NEURL3Q96EH8 262 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 C1orf50Q9BV19 199 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 C19orf24Q9BVV8 132 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 ASPNQ9BXN1 380 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 OR51I1Q9H343 314 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 MANSC1Q9H8J5 431 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 GIMAP2Q9UG22 337 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 ZDHHC2Q9UIJ5 367 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 TMED7-TICAM2A0A0A6YYA0 188 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 CENPVL1A0A0U1RR11 272 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 SLC22A31A6NKX4 558 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 B9A039 149 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 SCN2BO60939 215 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 VAMP5O95183 116 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 OR12D1P0DN82 309 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 UQCRBP14927 111 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 RAC2P15153 192 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 ZNF16P17020 682 aaPredicted RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 IGFBP5P24593 272 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 SERPINF1P36955 418 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 IDH2P48735 452 aaKnown RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 ANXA11P50995 505 aaKnown RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 FOXG1P55316 489 aaPredicted RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 SNRPD2P62316 118 aaKnown RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 EGR3Q06889 387 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 GNA13Q14344 377 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 EFNB3Q15768 340 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 DPY19L1Q2PZI1 675 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 FAM120AOSQ5T036 256 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 SAXO2Q658L1 398 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 OR4F3Q6IEY1 312 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 KLHL24Q6TFL4 600 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 UGT2A3Q6UWM9 527 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 FRRS1Q6ZNA5 592 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 ZNF440Q8IYI8 595 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 KIRREL3Q8IZU9 778 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 OR4A15Q8NGL6 344 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 ABHD4Q8TB40 342 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 MAGEE2Q8TD90 523 aaPredicted RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 UBLCP1Q8WVY7 318 aaPredicted RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 XAGE5Q8WWM1 108 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 TESCQ96BS2 214 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 TRNT1Q96Q11 434 aaKnown RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 KATNB1Q9BVA0 655 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 MTHFD2LQ9H903 347 aaPredicted RBP7.55□□□□□ -1.2
VRK1-206ENST00000557222 SLC7A10Q9NS82 523 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 TMEM45AQ9NWC5 275 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 OSGIN1Q9UJX0 560 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 TMED7Q9Y3B3 224 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 PCDHB14Q9Y5E9 798 aa7.55□□□□□ -1.2
VRK1-206ENST00000557222 ARPC4-TTLL3A0A0A6YYG9 625 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 A0A1W2PR80 420 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 AGAP5A6NIR3 686 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 DBX1A6NMT0 343 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 VSTM5A8MXK1 200 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 RGS13O14921 159 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 CRYAAP02489 173 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 HPXP02790 462 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 GPIP06744 558 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 IMPDH2P12268 514 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 APEHP13798 732 aaKnown RBP7.54□□□□□ -1.2
VRK1-206ENST00000557222 ZNF23P17027 643 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 GIFP27352 417 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 RYKP34925 604 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 KHKP50053 298 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 PPOXP50336 477 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 CLNS1AP54105 237 aaKnown RBP7.54□□□□□ -1.2
VRK1-206ENST00000557222 HPCAP84074 193 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 LRRC74AQ0VAA2 488 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 GGTLC2Q14390 218 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 CASP8Q14790 479 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 ZSWIM7Q19AV6 140 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 TSPO2Q5TGU0 170 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 LRRC74BQ6ZQY2 392 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 CLECL1Q8IZS7 167 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 RFLNBQ8N5W9 214 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 ZIC4Q8N9L1 334 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 BHLHE22Q8NFJ8 381 aaPredicted RBP7.54□□□□□ -1.2
VRK1-206ENST00000557222 OR4F15Q8NGB8 312 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 HTRA1Q92743 480 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 ZG16BQ96DA0 208 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 MSI2Q96DH6 328 aaKnown RBP7.54□□□□□ -1.2
VRK1-206ENST00000557222 FBXO17Q96EF6 278 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms