RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 THBS4P35443 961 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 SLC18A1P54219 525 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 PLAURQ03405 335 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 EMX2Q04743 252 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 HGFACQ04756 655 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 MAD2L1Q13257 205 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-223ENST00000556689 RIN1Q13671 783 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 OR7A5Q15622 319 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 FAM174BQ3ZCQ3 159 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 TNFAIP8L3Q5GJ75 292 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 RINLQ6ZS11 566 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 ZCCHC23Q6ZST2 131 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 SPATA21Q7Z572 469 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 CMIPQ8IY22 773 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 C3orf56Q8N813 242 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 ZMYND19Q96E35 227 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-223ENST00000556689 ANKRD27Q96NW4 1050 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 PAIP2Q9BPZ3 127 aaKnown RBP10.97□□□□□ -0.65
SHMT2-223ENST00000556689 METTL17Q9H7H0 456 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-223ENST00000556689 ZNF442Q9H7R0 627 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 A0A096LPE4 126 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 PRSS51A0A1B0GVH4 220 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 A0A1W2PPZ6 126 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 AQP7P3A6NL99 342 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 FAAHO00519 579 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 VAMP5O95183 116 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 CPSF4O95639 269 aaKnown RBP10.96□□□□□ -0.65
SHMT2-223ENST00000556689 UQCRBP14927 111 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 CXCR1P25024 350 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 COMPP49747 757 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-223ENST00000556689 SELENOPP49908 381 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 TUBA1BP68363 451 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 TUBA4AP68366 448 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 HPCAP84074 193 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 LGALS3BPQ08380 585 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 FUT5Q11128 374 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 SCGB2A2Q13296 93 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 CCNIQ14094 377 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 GNA13Q14344 377 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 TRIP10Q15642 601 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 ADRM1Q16186 407 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 GSTA3Q16772 222 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 SAXO2Q658L1 398 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 DEF8Q6ZN54 512 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 CREB3L2Q70SY1 520 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 TUBA1AQ71U36 451 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 GLCCI1Q86VQ1 547 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 SVOPLQ8N434 492 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 VPS37AQ8NEZ2 397 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 OR8J2Q8NGG1 315 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 TCP10LQ8TDR4 215 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 GCDHQ92947 438 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-223ENST00000556689 MTHFD2LQ9H903 347 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-223ENST00000556689 DYNLRB1Q9NP97 96 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 INTS9Q9NV88 658 aaKnown RBP10.96□□□□□ -0.65
SHMT2-223ENST00000556689 NOP53Q9NZM5 478 aaKnown RBP10.96□□□□□ -0.65
SHMT2-223ENST00000556689 ZDHHC2Q9UIJ5 367 aa10.96□□□□□ -0.65
SHMT2-223ENST00000556689 PRAMEF27A3QJZ7 478 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 CFAP73A6NFT4 308 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 AGAP5A6NIR3 686 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 LYNX1G3V0Z9 82 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 IGKV3-15P01624 115 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 ADRA2AP08913 450 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 LYNX1P0DP58 116 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 CBR1P16152 277 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 CHI3L1P36222 383 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-223ENST00000556689 KHKP50053 298 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 ACTG1P63261 375 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 ANXA8L1Q5VT79 327 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 NIPAL3Q6P499 406 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 LINGO2Q7L985 606 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 ANKRD46Q86W74 232 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 LSRQ86X29 649 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-223ENST00000556689 IL17RDQ8NFM7 739 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 SEMA6DQ8NFY4 1073 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 MGARPQ8TDB4 240 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 ZNF418Q8TF45 676 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-223ENST00000556689 CKAP2Q8WWK9 683 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 NEURL3Q96EH8 262 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 TRNT1Q96Q11 434 aaKnown RBP10.95□□□□□ -0.66
SHMT2-223ENST00000556689 MECRQ9BV79 373 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 TAPBPLQ9BX59 468 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 DPY30Q9C005 99 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 ADPRHL2Q9NX46 363 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 MARCOQ9UEW3 520 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-223ENST00000556689 PRDM4Q9UKN5 801 aa10.95□□□□□ -0.66
SHMT2-223ENST00000556689 TMEM89A2RUT3 159 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 TMEM229AB2RXF0 380 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 HMGN4O00479 90 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 TYROBPO43914 113 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 UPK3AO75631 287 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 IGFBP1P08833 259 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-223ENST00000556689 IL7RP16871 459 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 SERPINB5P36952 375 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 P2RY4P51582 365 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 SH3BGRP55822 239 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-223ENST00000556689 IL1RL1Q01638 556 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 ROR2Q01974 943 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms