RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 C7orf66A4D0T2 115 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 NPIPA7E9PJI5 369 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 LANCL1O43813 399 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 DCNP07585 359 aaKnown RBP1.92□□□□□ -2.1
SCFD1-216ENST00000555550 NPIPA8P0DM63 369 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 PGAM1P18669 254 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 CMA1P23946 247 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 CYP2F1P24903 491 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 CCND2P30279 289 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 BTCP35070 178 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 SPIBQ01892 262 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 REG3AQ06141 175 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 TP53I3Q53FA7 332 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 SLC10A5Q5PT55 438 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 TPGS2Q68CL5 300 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 KCNIP4Q6PIL6 250 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 HSDL2Q6YN16 418 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 Q6ZR03 302 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 MMAAQ8IVH4 418 aaKnown RBP1.92□□□□□ -2.1
SCFD1-216ENST00000555550 MYOCDQ8IZQ8 938 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 PGAM4Q8N0Y7 254 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 LRRC43Q8N309 656 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 FAM86B1Q8N7N1 296 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 DNAJC19Q96DA6 116 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 RIT2Q99578 217 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 ECSITQ9BQ95 431 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 TMEM246Q9BRR3 403 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 MRPL13Q9BYD1 178 aaKnown RBP1.92□□□□□ -2.1
SCFD1-216ENST00000555550 DNTTIP1Q9H147 329 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 DEFB127Q9H1M4 99 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 POPDC2Q9HBU9 364 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 TM9SF3Q9HD45 589 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 SLC17A5Q9NRA2 495 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 CLCF1Q9UBD9 225 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 ZNF222Q9UK12 451 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 NPIPA1Q9UND3 350 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 ABCC9O60706 1549 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 CABIN1Q9Y6J0 2220 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 KRT87PA6NCN2 255 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 C12orf71A8MTZ7 269 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 CHADO15335 359 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 SEC22BO75396 215 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 OPN1MWP04001 364 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 OPN1MW2P0DN77 364 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 OPN1MW3P0DN78 364 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 STMN1P16949 149 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 COX5AP20674 150 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 HMGCS1Q01581 520 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 PJVKQ0ZLH3 352 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 STK11Q15831 433 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 FAM71F2Q6NXP2 309 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 ZNF880Q6PDB4 577 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 BLOC1S2Q6QNY1 142 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 ISLR2Q6UXK2 745 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 MOB3BQ86TA1 216 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 CALHM3Q86XJ0 350 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 CCDC65Q8IXS2 484 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 CLEC4FQ8N1N0 589 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 OR1N2Q8NGR9 330 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 CCDC47Q96A33 483 aaKnown RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 MRPL38Q96DV4 380 aaKnown RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 SH3YL1Q96HL8 342 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 MRPL45Q9BRJ2 306 aaKnown RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 KRTAP4-1Q9BYQ7 146 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 TMEM117Q9H0C3 514 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 DPH5Q9H2P9 285 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 RBKSQ9H477 322 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 IL26Q9NPH9 171 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 GLRX2Q9NS18 164 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 SIGLEC8Q9NYZ4 499 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 SEC14L3Q9UDX4 400 aa1.91□□□□□ -2.1
SCFD1-216ENST00000555550 ZNF629Q9UEG4 869 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 MARCOQ9UEW3 520 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 PIN4Q9Y237 131 aaKnown RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 MRPS33Q9Y291 106 aaKnown RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 RPL36Q9Y3U8 105 aaKnown RBP1.91□□□□□ -2.1
SCFD1-216ENST00000555550 PLA2R1Q13018 1463 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 A0A1W2PP18 115 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 PRSS37A4D1T9 235 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 PEX7O00628 323 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 SLC31A2O15432 143 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 OR1F1O43749 312 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 RCBTB2O95199 551 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 IGLV2-23P01705 113 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 GYG1P46976 350 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 TDO2P48775 406 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 CAMLGP49069 296 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 KLHL30Q0D2K2 578 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 PDZK1IP1Q13113 114 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 SLC25A52Q3SY17 297 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 COA6Q5JTJ3 125 aaKnown RBP1.9□□□□□ -2.11
SCFD1-216ENST00000555550 LCN12Q6JVE5 192 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 NEGR1Q7Z3B1 354 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 RAET1EQ8TD07 263 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 ITCHQ96J02 903 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 NIPSNAP3BQ9BS92 247 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 EDEM2Q9BV94 578 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 SLCO1B3Q9NPD5 702 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 HOXC10Q9NYD6 342 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 NUP214P35658 2090 aaPredicted RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms