RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 SSX2Q16385 188 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 TEX261Q6UWH6 196 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 SSX9Q7RTT3 188 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 FGD2Q7Z6J4 655 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 LSRQ86X29 649 aaPredicted RBP15.24■□□□□ 0.03
PCNX1-209ENST00000554879 ZFP41Q8N8Y5 198 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 TM4SF19Q96DZ7 209 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 ULBP3Q9BZM4 244 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCNX1-209ENST00000554879 LRRN3Q9H3W5 708 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 ZNF639Q9UID6 485 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 U3KQ87 197 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 DAPL1A0PJW8 107 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 SYT5O00445 386 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 LDOC1O95751 146 aaPredicted RBP15.24■□□□□ 0.03
PCNX1-209ENST00000554879 OTX2P32243 289 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 TMEM164Q5U3C3 297 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 CPOQ8IVL8 374 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 IZUMO1Q8IYV9 350 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 MOSPD2Q8NHP6 518 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 NXPE2Q96DL1 559 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 ARL6Q9H0F7 186 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 PISDQ9UG56 409 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 FBXL2Q9UKC9 423 aa15.24■□□□□ 0.03
PCNX1-209ENST00000554879 MDC1Q14676 2089 aaKnown RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 SNRNP200O75643 2136 aaKnown RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 XKRYO14609 159 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 HCN1O60741 890 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 ATP1B1P05026 303 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 DCDP81605 110 aaKnown RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 FLI1Q01543 452 aaPredicted RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 MAPK14Q16539 360 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 GXYLT1Q4G148 440 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 ZNF628Q5EBL2 1059 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 MZT2AQ6P582 158 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 TMEM71Q6P5X7 295 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 OR4K13Q8NH42 304 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 POLR1DQ9Y2S0 133 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 CBX7O95931 251 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 LSM11P83369 360 aaKnown RBP eCLIP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 PRICKLE4Q2TBC4 344 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 PLK5Q496M5 336 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 IDNKQ5T6J7 187 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 OR13C2Q8NGS9 318 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 RNASE11Q8TAA1 199 aaKnown RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 CCDC74BQ96LY2 380 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 TGIF2Q9GZN2 237 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 A0A1B0GWA3 101 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 SMAD9O15198 467 aaKnown RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 SIGLEC5O15389 551 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 FOXS1O43638 330 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 ALDOBP05062 364 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 ZXDAP98168 799 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 C12orf45Q8N5I9 185 aaPredicted RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 GGHQ92820 318 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 ARL5BQ96KC2 179 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 NXF5Q9H1B4 397 aaKnown RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 UBQLN4Q9NRR5 601 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 NDRG4Q9ULP0 352 aaKnown RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 R4GN57 208 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 IDSB3KWA1 339 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 H0YIG0 161 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 PPP1R3DO95685 299 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 GPR3P46089 330 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 EPHA4P54764 986 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 PAPD4Q6PIY7 484 aaKnown RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 ANKRD9Q96BM1 317 aaPredicted RBP15.23■□□□□ 0.03
PCNX1-209ENST00000554879 C10orf90Q96M02 699 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 SARGQ9BW04 601 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 OR52D1Q9H346 318 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 IKZF2Q9UKS7 526 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 VDAC3Q9Y277 283 aa15.23■□□□□ 0.03
PCNX1-209ENST00000554879 G0S2P27469 103 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 PER3P56645 1201 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 FAHD1Q6P587 224 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 LINC00299Q6ZSB3 139 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 LANCL3Q6ZV70 420 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 CXXC5Q7LFL8 322 aaKnown RBP15.22■□□□□ 0.03
PCNX1-209ENST00000554879 RABEPKQ7Z6M1 372 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 PFN4Q8NHR9 129 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 SLC2A12Q8TD20 617 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 SNX33Q8WV41 574 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 FAM131CQ96AQ9 280 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 SECISBP2Q96T21 854 aaKnown RBP15.22■□□□□ 0.03
PCNX1-209ENST00000554879 STACQ99469 402 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 SSX3Q99909 188 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 WFDC6Q9BQY6 131 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 KLHL21Q9UJP4 597 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 TRBV11-1A0A0K0K1C0 115 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 A0A1W2PRQ8 180 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 PRAMEF27A3QJZ7 478 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 OPN1LWP04000 364 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 GYPBP06028 91 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 DGAT2L6Q6ZPD8 337 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 CHST8Q9H2A9 424 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 A4GNTQ9UNA3 340 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 LRRK1Q38SD2 2015 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 A0A087WV62 115 aa15.22■□□□□ 0.03
PCNX1-209ENST00000554879 FUT1P19526 365 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms