RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SPAG16Q8N0X2 631 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 LMX1AQ8TE12 382 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CXorf40AQ8TE69 158 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PIH1D2Q8WWB5 315 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 MTBPQ96DY7 904 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FAHD2AQ96GK7 314 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C3orf30Q96M34 536 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 COQ10AQ96MF6 247 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF599Q96NL3 588 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 OR2A14Q96R47 310 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CD180Q99467 661 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RNF2Q99496 336 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CMKLR1Q99788 373 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 WDR77Q9BQA1 342 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TRMOQ9BU70 441 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C20orf24Q9BUV8 137 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 MRPL13Q9BYD1 178 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SLC25A32Q9H2D1 315 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CDC42EP4Q9H3Q1 356 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 WDCPQ9H6R7 721 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 MYOZ1Q9NP98 299 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 UBE2TQ9NPD8 197 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RAD18Q9NS91 495 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SLC6A13Q9NSD5 602 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CRIM1Q9NZV1 1036 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 DNAJC12Q9UKB3 198 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SLC17A4Q9Y2C5 497 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CA5BQ9Y2D0 317 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 POLR3HQ9Y535 204 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ALG6Q9Y672 507 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RP1P56715 2156 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 LAMA1P25391 3075 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 A0A0D9SEW6 157 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TRBV7-9A0A0J9YWB2 115 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 IGHV5-10-1A0A0J9YXX1 117 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C13orf42A0A1B0GVH6 325 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF99A8MXY4 864 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C9JVG2 144 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SLC31A1O15431 190 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FGF10O15520 208 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TIMM8AO60220 97 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SSX4O60224 188 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CCDC22O60826 627 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SDC3O75056 442 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 DFFBO76075 338 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TNFAIP8O95379 198 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 IGSF6O95976 241 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CST1P01037 141 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C9P02748 559 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TCRBP04435 133 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RPN2P04844 631 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FGF1P05230 155 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RPLP0P05388 317 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 GPIP06744 558 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 NUDT17P0C025 328 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PET100P0DJ07 73 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FCGR2AP12318 317 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TPH1P17752 444 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 F8A1P23610 371 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CD1CP29017 333 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C21orf33P30042 268 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FOXN2P32314 431 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 HSPA9P38646 679 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PTGFRP43088 359 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RAB9AP51151 201 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 LSM6P62312 80 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 DLG1Q12959 904 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TNXAQ16473 311 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CDKN3Q16667 212 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PTCHD3Q3KNS1 767 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 VPS26BQ4G0F5 336 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 NKAIN2Q5VXU1 208 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ABLIM2Q6H8Q1 611 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 OR2A2Q6IF42 318 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TRNP1Q6NT89 227 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TCTN3Q6NUS6 607 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM71Q6P5X7 295 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 LRRN1Q6UXK5 716 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF562Q6V9R5 426 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 Q6ZVL8 140 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 VN1R5Q7Z5H4 357 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 IRF2BP2Q7Z5L9 587 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SLC47A2Q86VL8 602 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SERPINA9Q86WD7 417 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CIR1Q86X95 450 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CACUL1Q86Y37 369 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FAM90A1Q86YD7 464 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TGIF2LXQ8IUE1 241 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF100Q8IYN0 542 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SLC34A3Q8N130 599 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 LRRC75AQ8NAA5 344 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 OR5T2Q8NGG2 359 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 OR1L4Q8NGR5 311 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C16orf78Q8WTQ4 265 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CHPT1Q8WUD6 406 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 KCNJ9Q92806 393 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 COQ8BQ96D53 544 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 WFIKKN1Q96NZ8 548 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ERGIC2Q96RQ1 377 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF251Q9BRH9 671 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms