RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PLEKHF2Q9H8W4 249 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 NANOGQ9H9S0 305 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 BATF3Q9NR55 127 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 TESQ9UGI8 421 aaKnown RBP11.59□□□□□ -0.55
SHMT2-211ENST00000554310 AP3M1Q9Y2T2 418 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 AP4S1Q9Y587 144 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 ROS1P08922 2347 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 A8MVM7 634 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 TMEM229AB2RXF0 380 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 FRS3O43559 492 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 RAF1P04049 648 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 GPIP06744 558 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 IMPDH2P12268 514 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 ATP6V1B2P21281 511 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 IL32P24001 234 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 DNASE1P24855 282 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 PCBP3P57721 371 aaKnown RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 H3F3AP84243 136 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 LIPEQ05469 1076 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 BEX5Q5H9J7 111 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 ATG4DQ86TL0 474 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 CXorf67Q86X51 503 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 PTOV1Q86YD1 416 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 ZNF100Q8IYN0 542 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 KISS1RQ969F8 398 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 DNAJA3Q96EY1 480 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 ZC3HAV1LQ96H79 300 aaKnown RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 KCTD14Q9BQ13 255 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 NAA11Q9BSU3 229 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 ALG2Q9H553 416 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 KAT8Q9H7Z6 458 aaKnown RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 C12orf10Q9HB07 376 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 ARMC1Q9NVT9 282 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 SLC13A4Q9UKG4 626 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 PLEKHA6Q9Y2H5 1048 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 SNX13Q9Y5W8 968 aa11.58□□□□□ -0.56
SHMT2-211ENST00000554310 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
SHMT2-211ENST00000554310 MTORP42345 2549 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 A0A1W2PPR1 153 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 LIPT2A6NK58 231 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 ZNF814B7Z6K7 855 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 SIAH2O43255 324 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 THBDP07204 575 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 COX5AP20674 150 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 FPR1P21462 350 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 AQP1P29972 269 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 ART1P52961 327 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 IST1P53990 364 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 NR1H2P55055 460 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 RGS8P57771 180 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-211ENST00000554310 ITGADQ13349 1161 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 SELPLGQ14242 412 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 RABL3Q5HYI8 236 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 SFRP5Q5T4F7 317 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 C1orf140Q5VVS0 124 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 ANKRD34AQ69YU3 496 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 C5orf46Q6UWT4 87 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 SPNS3Q6ZMD2 512 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 ARMC8Q8IUR7 673 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 LSMEM1Q8N8F7 131 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 STK35Q8TDR2 534 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 SLCO4A1Q96BD0 722 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 APH1AQ96BI3 265 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 S100PBPQ96BU1 408 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 MBD6Q96DN6 1003 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 PIK3IP1Q96FE7 263 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 NR1H4Q96RI1 486 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-211ENST00000554310 FOXC2Q99958 501 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 PKP2Q99959 881 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 SH3GL1Q99961 368 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 TAPBPLQ9BX59 468 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 TRIM2Q9C040 744 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 LIME1Q9H400 295 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 CCM2LQ9NUG4 571 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-211ENST00000554310 RPS6KB2Q9UBS0 482 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 PRSS50Q9UI38 385 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 SLC9A8Q9Y2E8 581 aa11.57□□□□□ -0.56
SHMT2-211ENST00000554310 NOSIPQ9Y314 301 aaKnown RBP11.57□□□□□ -0.56
SHMT2-211ENST00000554310 MAP1AP78559 2803 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 AQP7P3A6NL99 342 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 ELOA3DA6NLF2 546 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 ARPC2O15144 300 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 RAMP1O60894 148 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 NPIPB7O75200 414 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 MFN2O95140 757 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 ATE1O95260 518 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 AHSA1O95433 338 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 ADAP00813 363 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 PNMTP11086 282 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 UMPSP11172 480 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 HTR2AP28223 471 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 PCGF2P35227 344 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 HOXC5Q00444 222 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 BLMHQ13867 455 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 KEAP1Q14145 624 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 OR7A5Q15622 319 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 ELOA3BQ3SY89 546 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 OTUD3Q5T2D3 398 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 INTS11Q5TA45 600 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms