RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SLC2A5P22732 501 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 CD82P27701 267 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 GABRR2P28476 465 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PDHA2P29803 388 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 FCGR2CP31995 323 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ACVR1BP36896 505 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 SLC26A3P40879 764 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 GSSP48637 474 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TMED10P49755 219 aaKnown RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 RAB10P61026 200 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 RPL8P62917 257 aaKnown RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 GUCY2DQ02846 1103 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ZNF85Q03923 595 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 SCRN3Q0VDG4 424 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 CDH17Q12864 832 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ITPK1Q13572 414 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 RCAN2Q14206 197 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 LAGE3Q14657 143 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 CD226Q15762 336 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ZIC1Q15915 447 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 NDUFA9Q16795 377 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PPP1R3AQ16821 1122 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 DUSP7Q16829 419 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 CNPY1Q3B7I2 92 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 MS4A18Q3C1V0 323 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PTPN20Q4JDL3 420 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 LY6G6FQ5SQ64 297 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 AP1ARQ63HQ0 302 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 C22orf42Q6IC83 251 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 REEP3Q6NUK4 255 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 FAHD2BQ6P2I3 314 aaPredicted RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 ZNF836Q6ZNA1 936 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PGAP1Q75T13 922 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TRMT10CQ7L0Y3 403 aaKnown RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 NDUFAF7Q7L592 441 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 SNX20Q7Z614 316 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 SCD5Q86SK9 330 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 IFNEQ86WN2 208 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 GPR65Q8IYL9 337 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ZNF100Q8IYN0 542 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ZBED8Q8IZ13 594 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 MCOLN2Q8IZK6 566 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 CMTM8Q8IZV2 173 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ARHGAP18Q8N392 663 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 CSNK1A1LQ8N752 337 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 SAMD12Q8N8I0 201 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TTC29Q8NA56 475 aaPredicted RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 FNDC5Q8NAU1 212 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 INO80EQ8NBZ0 244 aaPredicted RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 FBXL13Q8NEE6 735 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 OR10H4Q8NGA5 316 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 OR5AP2Q8NGF4 316 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 OR52E5Q8NH55 327 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PLPPR1Q8TBJ4 325 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PAQR8Q8TEZ7 354 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 GATAD1Q8WUU5 269 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 CAPSLQ8WWF8 208 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TOP1MTQ969P6 601 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 APH1AQ96BI3 265 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 FAF2Q96CS3 445 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ZBED6CLQ96FA7 236 aaPredicted RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 FAHD2AQ96GK7 314 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ARL5BQ96KC2 179 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 RCHY1Q96PM5 261 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TRNT1Q96Q11 434 aaKnown RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 ALKBH3Q96Q83 286 aaPredicted RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 CNN2Q99439 309 aaKnown RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 ATP5SQ99766 215 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 P2RY13Q9BPV8 354 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 C19orf43Q9BQ61 176 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 RAB34Q9BZG1 259 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TM6SF2Q9BZW4 377 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 RHBGQ9H310 441 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 SMYD3Q9H7B4 428 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 MRPL47Q9HD33 250 aaKnown RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 B3GAT2Q9NPZ5 323 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 NRBP2Q9NSY0 501 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PAK1IP1Q9NWT1 392 aaPredicted RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 THUMPD1Q9NXG2 353 aaKnown RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 NUDT4Q9NZJ9 180 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 SLC2A6Q9UGQ3 507 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ZNF229Q9UJW7 825 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 GGA2Q9UJY4 613 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PNPLA6Q8IY17 1366 aa1.84□□□□□ -2.12
SRP54-204ENST00000553923 ABCA7Q8IZY2 2146 aa1.84□□□□□ -2.12
SRP54-204ENST00000553923 KBTBD11-OT1A0A1B0GTJ5 212 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 A0A1W2PPE3 182 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 A0A1W2PPV9 198 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 CCDC182A6NF36 153 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 MSGN1A6NI15 193 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SAGE2PA6NJ88 616 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 RNF212BA8MTL3 300 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 TRDCB7Z8K6 153 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 NPIPB9F8W1W9 429 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 PDLIM1O00151 329 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 KDELR3O43731 214 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 PRKAB2O43741 272 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 FCN3O75636 299 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 SMC2O95347 1197 aa1.83□□□□□ -2.12
SRP54-204ENST00000553923 PRB2P02812 416 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms