RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 LGI1O95970 557 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 GPIP06744 558 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 PPP3CBP16298 524 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 PSMB1P20618 241 aaKnown RBP20.9■□□□□ 0.94
TDP1-205ENST00000553527 DNASE1P24855 282 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 H3F3AP84243 136 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 OTUD3Q5T2D3 398 aaPredicted RBP20.9■□□□□ 0.94
TDP1-205ENST00000553527 TMEM99Q8N816 258 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 STEAP2Q8NFT2 490 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 OR52E4Q8NGH9 312 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 ARHGDIGQ99819 225 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 TAPBPLQ9BX59 468 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 HDHD5Q9BXW7 423 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 LRMDAQ9H2I8 198 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 MUC13Q9H3R2 512 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 RPS6KA6Q9UK32 745 aa20.9■□□□□ 0.94
TDP1-205ENST00000553527 AKAP9Q99996 3911 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 IGKV3D-15A0A087WSY6 115 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 ELOA3DA6NLF2 546 aaPredicted RBP20.89■□□□□ 0.93
TDP1-205ENST00000553527 M0R3H8 397 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 LYZL6O75951 148 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 ITGADQ13349 1161 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 KEAP1Q14145 624 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 PDK3Q15120 406 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 ELOA3BQ3SY89 546 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 CBLL1Q75N03 491 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 ATG4DQ86TL0 474 aaPredicted RBP20.89■□□□□ 0.93
TDP1-205ENST00000553527 ELOA3Q8NG57 546 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 VANGL1Q8TAA9 524 aaPredicted RBP20.89■□□□□ 0.93
TDP1-205ENST00000553527 KISS1RQ969F8 398 aaPredicted RBP20.89■□□□□ 0.93
TDP1-205ENST00000553527 NSMCE2Q96MF7 247 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 GORASP2Q9H8Y8 452 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 TESQ9UGI8 421 aaKnown RBP20.89■□□□□ 0.93
TDP1-205ENST00000553527 PRDM4Q9UKN5 801 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 SLC9A8Q9Y2E8 581 aa20.89■□□□□ 0.93
TDP1-205ENST00000553527 LIPT2A6NK58 231 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 GPR171O14626 319 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 GSC2O15499 205 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 MRPL33O75394 65 aaKnown RBP20.88■□□□□ 0.93
TDP1-205ENST00000553527 HTR2AP28223 471 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 NTF4P34130 210 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 SELENOWP63302 87 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 NRF1Q16656 503 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 C1orf140Q5VVS0 124 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 Q6ZT83 130 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 GPAT4Q86UL3 456 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 RANBP3LQ86VV4 465 aaPredicted RBP20.88■□□□□ 0.93
TDP1-205ENST00000553527 APH1AQ96BI3 265 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 SLC25A36Q96CQ1 311 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 HS3ST6Q96QI5 342 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 WFDC6Q9BQY6 131 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 CADM1Q9BY67 442 aaKnown RBP20.88■□□□□ 0.93
TDP1-205ENST00000553527 SAMD4AQ9UPU9 718 aaKnown RBP20.88■□□□□ 0.93
TDP1-205ENST00000553527 SH3GLB1Q9Y371 365 aa20.88■□□□□ 0.93
TDP1-205ENST00000553527 A0A1B0GWA3 101 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 STAMBPO95630 424 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 RPS5P46782 204 aaKnown RBP20.87■□□□□ 0.93
TDP1-205ENST00000553527 TRIM25Q14258 630 aaKnown RBP20.87■□□□□ 0.93
TDP1-205ENST00000553527 P2RY6Q15077 328 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 TMEM225Q6GV28 225 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 PAQR6Q6TCH4 344 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 PAMR1Q6UXH9 720 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 BHLHA15Q7RTS1 189 aaPredicted RBP20.87■□□□□ 0.93
TDP1-205ENST00000553527 NINJ1Q92982 152 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 ASB9Q96DX5 294 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 HSH2DQ96JZ2 352 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 TRIM2Q9C040 744 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 ACTR3BQ9P1U1 418 aa20.87■□□□□ 0.93
TDP1-205ENST00000553527 PRRC2AP48634 2157 aaKnown RBP20.86■□□□□ 0.93
TDP1-205ENST00000553527 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.86■□□□□ 0.93
TDP1-205ENST00000553527 KLF4O43474 513 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 AHSA1O95433 338 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 RAF1P04049 648 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 TNFRSF1BP20333 461 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 IGHV1-2P23083 117 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 SLC16A1P53985 500 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 STK11Q15831 433 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 ALG10BQ5I7T1 473 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 CASP12Q6UXS9 341 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 VTCN1Q7Z7D3 282 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 CARM1Q86X55 608 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 P3H2Q8IVL5 708 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 OR6T1Q8NGN1 323 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 KTI12Q96EK9 354 aaPredicted RBP20.86■□□□□ 0.93
TDP1-205ENST00000553527 PLPPR2Q96GM1 343 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 UBTD1Q9HAC8 227 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 TMEM27Q9HBJ8 222 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 DCAF13Q9NV06 445 aaKnown RBP20.86■□□□□ 0.93
TDP1-205ENST00000553527 SELENONQ9NZV5 590 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 CELSR1Q9NYQ6 3014 aa20.86■□□□□ 0.93
TDP1-205ENST00000553527 TMEM229AB2RXF0 380 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 ATP6V1B2P21281 511 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 FAPQ12884 760 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 SLC17A1Q14916 467 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 TESK1Q15569 626 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 OR1Q1Q15612 314 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 TAB1Q15750 504 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 IFI44LQ53G44 452 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 BEX5Q5H9J7 111 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 FBXW9Q5XUX1 488 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms