RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 RSRC1Q96IZ7 334 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF587Q96SQ5 575 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 TM9SF2Q99805 663 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 PSD2Q9BQI7 771 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 BCO1Q9HAY6 547 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 FANCFQ9NPI8 374 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 MRPL39Q9NYK5 338 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 MCTS1Q9ULC4 181 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 SLC5A6Q9Y289 635 aa13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 SPTAN1Q13813 2472 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 SPTBN1Q01082 2364 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-204ENST00000553405 UTP20O75691 2785 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 MS4A18H0YCH9 400 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 CDC42EP2O14613 210 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 SS18L1O75177 396 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 ENTPD5O75356 428 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 TIPRLO75663 272 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 KRT36O76013 467 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 GADD45GO95257 159 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 CH25HO95992 272 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 MT-ATP6P00846 226 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 LDLRP01130 860 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 FCGR2AP12318 317 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 IFNA8P32881 189 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 KIR2DL2P43627 348 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 IST1P53990 364 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 RPS4XP62701 263 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 PPP1R8Q12972 351 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 SLC17A1Q14916 467 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 PDK3Q15120 406 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 EXOC3L2Q2M3D2 409 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 MS4A18Q3C1V0 323 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 TMPRSS11FQ6ZWK6 438 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 ZER1Q7Z7L7 766 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 MEX3DQ86XN8 651 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 LIX1LQ8IVB5 337 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 ZIC4Q8N9L1 334 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 SLC25A36Q96CQ1 311 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 ZFP3Q96NJ6 502 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 ALPK1Q96QP1 1244 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 FKRPQ9H9S5 495 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 GP6Q9HCN6 339 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 DNAJB9Q9UBS3 223 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF229Q9UJW7 825 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 RNF6Q9Y252 685 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 B3GALT5Q9Y2C3 310 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 MED31Q9Y3C7 131 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 CORINQ9Y5Q5 1042 aa13.22□□□□□ -0.29
MTHFD1-204ENST00000553405 LOC102725191A0A1B0GVB3 256 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 A0A1W2PNV4 684 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 HTR3EA5X5Y0 456 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 PLPP3O14495 311 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 OR7A10O76100 309 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 SYNGR4O95473 234 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 CST1P01037 141 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 CGAP01215 116 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 IFI30P13284 250 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF26P17031 533 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 FUT1P19526 365 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 UQCRC1P31930 480 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 SMIM11AP58511 58 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 MFSD13AQ14CX5 517 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 POU4F3Q15319 338 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 ATP6AP1Q15904 470 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 FGD3Q5JSP0 725 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 OTUD3Q5T2D3 398 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 TMEM211Q6ICI0 200 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 HMBOX1Q6NT76 420 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 ZNF730Q6ZMV8 503 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 CHMP1BQ7LBR1 199 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 CCDC71Q8IV32 467 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 GCNT2Q8N0V5 402 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 SLC43A2Q8N370 569 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 ITLN2Q8WWU7 325 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 INTS12Q96CB8 462 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 BPIFA2Q96DR5 249 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 SGTBQ96EQ0 304 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 GMPPAQ96IJ6 420 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 TAPBPLQ9BX59 468 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 KLHL4Q9C0H6 718 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 CHST11Q9NPF2 352 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 TAS2R5Q9NYW4 299 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 KLHL13Q9P2N7 655 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 AP4S1Q9Y587 144 aa13.21□□□□□ -0.29
MTHFD1-204ENST00000553405 ALPK2Q86TB3 2170 aa13.21□□□□□ -0.3
MTHFD1-204ENST00000553405 ZNF724A8MTY0 619 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 TNFRSF11BO00300 401 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 CLOCKO15516 846 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 ZG16O60844 167 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 IL18BPO95998 194 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 CRHP06850 196 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 CBLP22681 906 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 EDNRAP25101 427 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 AGTR1P30556 359 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 FXYD6P3P58550 94 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 ZP4Q12836 540 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 GK3PQ14409 553 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms