RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 HTR2AP28223 471 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 CPOXP36551 454 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 OR3A2P47893 321 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 SLC9A3P48764 834 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 TPD52P55327 224 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 SH3BGRP55822 239 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 PUDPQ08623 228 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 PMS2P3Q13401 168 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 DGCR6Q14129 220 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 SLC17A1Q14916 467 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 GLIPR1L2Q4G1C9 344 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 LINC00114Q6XXX2 140 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 MEX3BQ6ZN04 569 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 GDF7Q7Z4P5 450 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 PXKQ7Z7A4 578 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 MED12LQ86YW9 2145 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 DMRTC2Q8IXT2 367 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 CCDC36Q8IYA8 594 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 OR5J2Q8NH18 312 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 FNDC8Q8TC99 324 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 ABHD3Q8WU67 409 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 TMEM239Q8WW34 195 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 ROBO4Q8WZ75 1007 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 C14orf79Q96F83 325 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 HSH2DQ96JZ2 352 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 ARL5BQ96KC2 179 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 ADAD1Q96M93 576 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 PSD2Q9BQI7 771 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 ZNF426Q9BUY5 554 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 SRXN1Q9BYN0 137 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 OR11A1Q9GZK7 315 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 B3GAT2Q9NPZ5 323 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 TAS2R1Q9NYW7 299 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 UPB1Q9UBR1 384 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 TMCC3Q9ULS5 477 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 MAGED1Q9Y5V3 778 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 ENPP4Q9Y6X5 453 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 COL12A1Q99715 3063 aa9.15□□□□□ -0.95
TRAFD1-208ENST00000552890 ASH1LQ9NR48 2969 aaKnown RBP9.15□□□□□ -0.95
TRAFD1-208ENST00000552890 A1L4Q6 167 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 AQP12BA6NM10 295 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 CENPBD1B2RD01 187 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 ARPC2O15144 300 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 CLDN1O95832 211 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 CGAP01215 116 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 FABP3P05413 133 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 EPXP11678 715 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 HOXB1P14653 301 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 IGFBP2P18065 325 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 TCN1P20061 433 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 SHC1P29353 583 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 HOXC12P31275 282 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 RPS5P46782 204 aaKnown RBP9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 PRPS1P60891 318 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 SIRPAP78324 504 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 HOXC5Q00444 222 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 IL1RL1Q01638 556 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 CHRNB3Q05901 458 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 TFF3Q07654 80 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 ITGADQ13349 1161 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 FBXW9Q5XUX1 488 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 FAM205BPQ63HN1 556 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 LCN8Q6JVE9 175 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 CCDC121Q6ZUS5 278 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 BTLAQ7Z6A9 289 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 GPAT4Q86UL3 456 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 UEVLDQ8IX04 471 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 TUSC5Q8IXB3 177 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 AQP12AQ8IXF9 295 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 ACBD4Q8NC06 268 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 NAXEQ8NCW5 288 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 OR9K2Q8NGE7 335 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 LIPHQ8WWY8 451 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 ACOT11Q8WXI4 607 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 HSD17B8Q92506 261 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 SLC25A36Q96CQ1 311 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 MUCL1Q96DR8 90 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 PIP5K1AQ99755 562 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 IL1RAPQ9NPH3 570 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 ASB6Q9NWX5 421 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 EGFL7Q9UHF1 273 aa9.14□□□□□ -0.95
TRAFD1-208ENST00000552890 A0A1W2PRG6 482 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 NKX2-6A6NCS4 301 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 NPIPB13A6NJU9 1138 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 ZNF726A6NNF4 738 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 NPIPB4C9JG80 1138 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 FTCDNL1E5RQL4 147 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 SLC43A1O75387 559 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 UBOX5O94941 541 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 AKR7A3O95154 331 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 H1F0P07305 194 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 IMPDH2P12268 514 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 IL32P24001 234 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 DAP3P51398 398 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 NR1H2P55055 460 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 ZP4Q12836 540 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 FOXF2Q12947 444 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 BNIP1Q12981 228 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 STK11Q15831 433 aa9.13□□□□□ -0.95
TRAFD1-208ENST00000552890 ZNF730Q6ZMV8 503 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms