RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 CSF2RBP32927 897 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 KIR2DL3P43628 341 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 GPR3P46089 330 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF85Q03923 595 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 PRKCDQ05655 676 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 TPBGQ13641 420 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 RSPO4Q2I0M5 234 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-215ENST00000552823 PRTGQ2VWP7 1150 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF362Q5T0B9 420 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-215ENST00000552823 CORO6Q6QEF8 472 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 LRRN1Q6UXK5 716 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 GPAT4Q86UL3 456 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 LINC00346Q8IVM7 164 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 SLC38A9Q8NBW4 561 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 OR6C4Q8NGE1 309 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 TRMT10AQ8TBZ6 339 aaKnown RBP5.11□□□□□ -1.59
LIMA1-215ENST00000552823 PTPMT1Q8WUK0 201 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-215ENST00000552823 HLA-CQ95604 372 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 SARGQ9BW04 601 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 SRRQ9GZT4 340 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 CDCP1Q9H5V8 836 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 PALMDQ9NP74 551 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 FGF20Q9NP95 211 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-215ENST00000552823 TBCCD1Q9NVR7 557 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 GRHPRQ9UBQ7 328 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 SERTAD3Q9UJW9 196 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 ZMIZ1Q9ULJ6 1067 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 B3GNT3Q9Y2A9 372 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 SF3B6Q9Y3B4 125 aaKnown RBP5.11□□□□□ -1.59
LIMA1-215ENST00000552823 UGT2A1Q9Y4X1 527 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 V9GYH0 126 aa5.11□□□□□ -1.59
LIMA1-215ENST00000552823 SLC22A31A6NKX4 558 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 POLR1CO15160 346 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 IDH3BO43837 385 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 MRPS14O60783 128 aaKnown RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF217O75362 1048 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 NSA2O95478 260 aaKnown RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 GABRA5P31644 462 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SFTPDP35247 375 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 RFX2P48378 723 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SKP1P63208 163 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 LTBQ06643 244 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 LCN1P1Q5VSP4 162 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 AGAP7PQ5VUJ5 663 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 GARNL3Q5VVW2 1013 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SLC6A19Q695T7 634 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 LINGO2Q7L985 606 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF550Q7Z398 422 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF676Q8N7Q3 588 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 KIAA1958Q8N8K9 716 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 NAXEQ8NCW5 288 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 MAFAQ8NHW3 353 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ADAMTS18Q8TE60 1221 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ALG12Q9BV10 488 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CHIAQ9BZP6 476 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SEMA4CQ9C0C4 833 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZMAT3Q9HA38 289 aaKnown RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 NEK6Q9HC98 313 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 NOX4Q9NPH5 578 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CMC2Q9NRP2 79 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF222Q9UK12 451 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 COLQQ9Y215 455 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 A0A087WV62 115 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 IGHV1OR21-1A0A087WYE8 117 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 TMEM129A0AVI4 362 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 TLCD2A6NGC4 264 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 PRR32B1ATL7 298 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 E9PQ18 207 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF264O43296 627 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SLC16A7O60669 478 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF354AO60765 605 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 RGS9O75916 674 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CSN2P05814 226 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 THBS1P07996 1170 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CELA2AP08217 269 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ADRB1P08588 477 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 RORAP35398 523 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CCR5P51681 352 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CCR6P51684 374 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 GBX2P52951 348 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 YOD1Q5VVQ6 348 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 TUBA3EQ6PEY2 450 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 GID4Q8IVV7 300 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF595Q8IYB9 648 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 STT3BQ8TCJ2 826 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 METTL21AQ8WXB1 218 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 TAAR8Q969N4 342 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CTHRC1Q96CG8 243 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 OMA1Q96E52 524 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CNN2Q99439 309 aaKnown RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 STACQ99469 402 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ATF6BQ99941 703 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 BCL7BQ9BQE9 202 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 VN1R1Q9GZP7 353 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ABCG5Q9H222 651 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ADGRL4Q9HBW9 690 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 MED29Q9NX70 200 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 PAQR5Q9NXK6 330 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 KLRF1Q9NZS2 232 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms