RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 FOXJ3Q9UPW0 622 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 INSL6Q9Y581 213 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 TICRRQ7Z2Z1 1910 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 MPDZO75970 2070 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 CABIN1Q9Y6J0 2220 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 NOTCH4Q99466 2003 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 TUBAL3A6NHL2 446 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 IFITM5A6NNB3 132 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 EIF4E2O60573 245 aaKnown RBP4.46□□□□□ -1.7
LIMA1-214ENST00000552783 AKR7A3O95154 331 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 LYPD3O95274 346 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 PAPLNO95428 1278 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 RLN1P04808 185 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 CPN1P15169 458 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 MYOGP15173 224 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ADRA2CP18825 462 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ITGB8P26012 769 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 IFNGR2P38484 337 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 KCNJ3P48549 501 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 EFNB2P52799 333 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 CSNK1G2P78368 415 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ELAVL3Q14576 367 aaKnown RBP4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF234Q14588 700 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 UBXN2BQ14CS0 331 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 CDK5R1Q15078 307 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 RBMS2Q15434 407 aaKnown RBP4.46□□□□□ -1.7
LIMA1-214ENST00000552783 PUS10Q3MIT2 529 aaKnown RBP4.46□□□□□ -1.7
LIMA1-214ENST00000552783 UBE2NLQ5JXB2 153 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 HACD4Q5VWC8 232 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 PWWP2BQ6NUJ5 590 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ZC3H14Q6PJT7 736 aaKnown RBP4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ERN2Q76MJ5 926 aaKnown RBP4.46□□□□□ -1.7
LIMA1-214ENST00000552783 LNX2Q8N448 690 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 NUP43Q8NFH3 380 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 OR7G2Q8NG99 324 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 OR8K3Q8NH51 312 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ARRDC3Q96B67 414 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ELP4Q96EB1 424 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF514Q96K75 400 aaPredicted RBP4.46□□□□□ -1.7
LIMA1-214ENST00000552783 MRGPRX3Q96LB0 322 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 TNFRSF13CQ96RJ3 184 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 SYNDIG1Q9H7V2 258 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 PURGQ9UJV8 347 aaKnown RBP4.46□□□□□ -1.7
LIMA1-214ENST00000552783 GNG8Q9UK08 70 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 SIGLEC7Q9Y286 467 aa4.46□□□□□ -1.7
LIMA1-214ENST00000552783 TRAV1-2A0A0B4J238 106 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TRBV2A0A0J9YWF9 115 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 CARNS1A5YM72 827 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TMEM200CA6NKL6 621 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 GABARAPH6UMI1 98 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ABCD4O14678 606 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 CTDSPLO15194 276 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SIGLEC6O43699 453 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR2T1O43869 369 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 GMFGO60234 142 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TBX19O60806 448 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 KRT33AO76009 404 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 NDUFB6O95139 128 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PPP3CBP16298 524 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 BCL6P41182 706 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ANXA11P50995 505 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LY6G6FQ5SQ64 297 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 B3GNTL1Q67FW5 361 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LCTLQ6UWM7 567 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LRRN1Q6UXK5 716 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 DPPA4Q7L190 304 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ZAR1Q86SH2 424 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MCATQ8IVS2 390 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR6V1Q8N148 313 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR4C16Q8NGL9 310 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR10AC1Q8NH08 325 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR4K13Q8NH42 304 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 BRIX1Q8TDN6 353 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LCN9Q8WX39 176 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SMIM19Q96E16 107 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 HS6ST2Q96MM7 605 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MS4A4EQ96PG1 132 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MICU1Q9BPX6 476 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PELOQ9BRX2 385 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TMPRSS13Q9BYE2 586 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MFFQ9GZY8 342 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ZBP1Q9H171 429 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 IFT22Q9H7X7 185 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MRPS30Q9NP92 439 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FANCFQ9NPI8 374 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 CMC2Q9NRP2 79 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PHPT1Q9NRX4 125 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ABRACLQ9P1F3 81 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FBXO4Q9UKT5 387 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF443Q9Y2A4 671 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SLC6A5Q9Y345 797 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ADAM18Q9Y3Q7 739 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF780BQ9Y6R6 833 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 HEATR5AQ86XA9 2040 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LRRC72A6NJI9 287 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR6C76A6NM76 312 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 CDC123O75794 336 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ZFPL1O95159 310 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 HMGN1P05114 100 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LIPCP11150 499 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms