RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PRR5LQ6MZQ0 368 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 ARMCX5Q6P1M9 558 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 RFPL4BQ6ZWI9 263 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 FAM57BQ71RH2 274 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 OR5M9Q8NGP3 310 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.65□□□□□ -1.82
USP44-208ENST00000552440 CNIH3Q8TBE1 160 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 PHF10Q8WUB8 498 aaKnown RBP3.65□□□□□ -1.82
USP44-208ENST00000552440 PSMG2Q969U7 264 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 CEP19Q96LK0 163 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 ATP5SQ99766 215 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 FEM1AQ9BSK4 669 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 NIPAL2Q9H841 368 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 SAMSN1Q9NSI8 373 aaKnown RBP3.65□□□□□ -1.82
USP44-208ENST00000552440 RMND1Q9NWS8 449 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 BFARQ9NZS9 450 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 MRPS28Q9Y2Q9 187 aaKnown RBP3.65□□□□□ -1.82
USP44-208ENST00000552440 PAM16Q9Y3D7 125 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 AK6Q9Y3D8 172 aaKnown RBP3.65□□□□□ -1.82
USP44-208ENST00000552440 WIPI2Q9Y4P8 454 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 V9GYQ6 96 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 ROCK1Q13464 1354 aa3.65□□□□□ -1.82
USP44-208ENST00000552440 POLR2AP24928 1970 aaKnown RBP3.65□□□□□ -1.82
USP44-208ENST00000552440 WRNQ14191 1432 aaPredicted RBP eCLIP3.65□□□□□ -1.83
USP44-208ENST00000552440 ADGRA3Q8IWK6 1321 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 A0A0J9YVX5 310 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 SLC22A20A6NK97 555 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 A8MVM7 634 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 GATCO43716 136 aaKnown RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 RCBTB2O95199 551 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 KRT16P08779 473 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 PRSS56P0CW18 603 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 GATA1P15976 413 aaPredicted RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 H2AFXP16104 143 aaPredicted RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 DPEP1P16444 411 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 HLA-GP17693 338 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 IDSP22304 550 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 LHCGRP22888 699 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 RFX5P48382 616 aaPredicted RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 XKP51811 444 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 RPS15AP62244 130 aaKnown RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 RPS18P62269 152 aaKnown RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 MGAT3Q09327 533 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 ISXQ2M1V0 245 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 DCAF12Q5T6F0 453 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 DDI2Q5TDH0 399 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 PNCKQ6P2M8 343 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 METTL7BQ6UX53 244 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 GDPD4Q6W3E5 623 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 TIPARPQ7Z3E1 657 aaKnown RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 OR2W3Q7Z3T1 314 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 SLC39A11Q8N1S5 342 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 Q8N9P0 234 aaPredicted RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 ZNF738Q8NE65 137 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 OR5T2Q8NGG2 359 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 OR10V1Q8NGI7 309 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 OR4Q3Q8NH05 313 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 BAALCQ8WXS3 180 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 CDS1Q92903 461 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.65□□□□□ -1.83
USP44-208ENST00000552440 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 ZNF641Q96N77 438 aaPredicted RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 UTP23Q9BRU9 249 aaKnown RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 TIMM29Q9BSF4 260 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 APOOQ9BUR5 198 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 TUBB1Q9H4B7 451 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 DUS2Q9NX74 493 aaKnown RBP3.65□□□□□ -1.83
USP44-208ENST00000552440 MAT2BQ9NZL9 334 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 FBXL4Q9UKA2 621 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 CLEC4EQ9ULY5 219 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 AP3M1Q9Y2T2 418 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 RAI2Q9Y5P3 530 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 SAR1BQ9Y6B6 198 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 BCORL1Q5H9F3 1711 aa3.65□□□□□ -1.83
USP44-208ENST00000552440 USP42Q9H9J4 1324 aaKnown RBP3.64□□□□□ -1.83
USP44-208ENST00000552440 TRBV5-3A0A0A0MS03 114 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 C5orf60A6NFR6 353 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 MYMKA6NI61 221 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 E5RJQ4 531 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 RGS16O15492 202 aaPredicted RBP3.64□□□□□ -1.83
USP44-208ENST00000552440 KIAA0513O60268 411 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 TOM1O60784 492 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 KHDRBS3O75525 346 aaKnown RBP3.64□□□□□ -1.83
USP44-208ENST00000552440 ANXA9O76027 345 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 LYPLA2O95372 231 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 TNFAIP8O95379 198 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 PLEKHA8P1O95397 391 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 AP2A1O95782 977 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 CELA2AP08217 269 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 HOXC6P09630 235 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 OCM2P0CE71 109 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 CHRNB2P17787 502 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 RAB4AP20338 218 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 CMA1P23946 247 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 NBL1P41271 181 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 SRSF1Q07955 248 aaKnown RBP eCLIP3.64□□□□□ -1.83
USP44-208ENST00000552440 RGS1Q08116 209 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 GABRA6Q16445 453 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 C3AR1Q16581 482 aa3.64□□□□□ -1.83
USP44-208ENST00000552440 TMEM249Q2WGJ8 235 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms