RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 PPOXP50336 477 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 IDH3GP51553 393 aaPredicted RBP12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 CLNS1AP54105 237 aaKnown RBP12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 GSTA3Q16772 222 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 ZSWIM7Q19AV6 140 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 ZNF836Q6ZNA1 936 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 ZNF540Q8NDQ6 660 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 PANX1Q96RD7 426 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 SORT1Q99523 831 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 DOK1Q99704 481 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 TAPBPLQ9BX59 468 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 NUF2Q9BZD4 464 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 RAB1BQ9H0U4 201 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 PIF1Q9H611 641 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 ANK2Q01484 3957 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 ARPC4-TTLL3A0A0A6YYG9 625 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 TMEM129A0AVI4 362 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 CDHR4A6H8M9 788 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 A8MVM7 634 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 hCG_2039718K7EN88 272 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 FRS3O43559 492 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 LILRA1O75019 489 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 PDE5AO76074 875 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 IGLV1-44P01699 117 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 SERPINE1P05121 402 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 IGFBP1P08833 259 aaPredicted RBP12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 PRG2P13727 222 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 UQCRBP14927 111 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 RPL14P50914 215 aaKnown RBP12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 GNA13Q14344 377 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 TRIP10Q15642 601 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 CLIP4Q8N3C7 705 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 SVOPLQ8N434 492 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 OR52P1PQ8NH57 321 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 PNPOQ9NVS9 261 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 TMEFF2Q9UIK5 374 aaPredicted RBP12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 RAP2CQ9Y3L5 183 aa12.83□□□□□ -0.36
TMEM106C-216ENST00000551305 ZNF503-AS2A6NEH8 195 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 TMEM229AB2RXF0 380 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 LYNX1G3V0Z9 82 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 TCF21O43680 179 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 ALDOCP09972 364 aaKnown RBP12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 LYNX1P0DP58 116 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 ITGA2P17301 1181 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 GIFP27352 417 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 APEX1P27695 318 aaKnown RBP12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 SRP14P37108 136 aaKnown RBP12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 SLC1A6P48664 564 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 CHN2P52757 468 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 ARF1P84077 181 aaKnown RBP12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 ROR2Q01974 943 aaKnown RBP12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 DPY19L1Q2PZI1 675 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 C1orf140Q5VVS0 124 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 PRAMEF8Q5VWM4 474 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 PRAMEF7Q5VXH5 474 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 WBP2NLQ6ICG8 309 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 SPATA21Q7Z572 469 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 PEX5LQ8IYB4 626 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 OR4F15Q8NGB8 312 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 SLC25A36Q96CQ1 311 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 ZNF837Q96EG3 531 aaPredicted RBP12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 OR52E6Q96RD3 313 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 SNX18Q96RF0 628 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 ROPN1BQ9BZX4 212 aaPredicted RBP12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 ROPN1Q9HAT0 212 aaPredicted RBP12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 CHST2Q9Y4C5 530 aa12.82□□□□□ -0.36
TMEM106C-216ENST00000551305 NPIPB7O75200 414 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 IGKV3-15P01624 115 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 TACSTD2P09758 323 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 TFPTP0C1Z6 253 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 CBR1P16152 277 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 NPR2P20594 1047 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 CLDN17P56750 224 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 COPZ1P61923 177 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 C3orf36Q3SXR2 165 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 RPS26P11Q5JNZ5 115 aaPredicted RBP12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 ATG16L1Q676U5 607 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 ZNF440Q8IYI8 595 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 RFLNBQ8N5W9 214 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 TRIML2Q8N7C3 387 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 LINC01356Q8N9X3 169 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 NUP37Q8NFH4 326 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 MAGEE2Q8TD90 523 aaPredicted RBP12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 NEU4Q8WWR8 484 aaPredicted RBP12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 LINC00470Q9BZP3 86 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 SLC6A13Q9NSD5 602 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 SEC14L4Q9UDX3 406 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 RASD1Q9Y272 281 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 OR6C65A6NJZ3 312 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 VAMP5O95183 116 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 PNMTP11086 282 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 ETFAP13804 333 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 BGNP21810 368 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 ANXA11P50995 505 aaKnown RBP12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 MVDP53602 400 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 VSNL1P62760 191 aa12.81□□□□□ -0.36
TMEM106C-216ENST00000551305 HOXC5Q00444 222 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms