RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 RNF130Q86XS8 419 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 ZNF440Q8IYI8 595 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 POMGNT2Q8NAT1 580 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 OR9K2Q8NGE7 335 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 AENQ8WTP8 325 aaKnown RBP6.66□□□□□ -1.34
NEK3-201ENST00000550331 WDR60Q8WVS4 1066 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 DNAJA3Q96EY1 480 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 ZNF317Q96PQ6 595 aaPredicted RBP6.66□□□□□ -1.34
NEK3-201ENST00000550331 NUF2Q9BZD4 464 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 C20orf27Q9GZN8 174 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 ADAM19Q9H013 955 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 MANSC1Q9H8J5 431 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 MEAF6Q9HAF1 191 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 MOV10Q9HCE1 1003 aaKnown RBP6.66□□□□□ -1.34
NEK3-201ENST00000550331 OBP2BQ9NPH6 170 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 FKBP7Q9Y680 259 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 ATP23Q9Y6H3 246 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 PMF1-BGLAPU3KQ54 211 aa6.66□□□□□ -1.34
NEK3-201ENST00000550331 FREM1Q5H8C1 2179 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 ALPK2Q86TB3 2170 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 A0A096LPI6 279 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 ZC3H12DA2A288 527 aaKnown RBP6.65□□□□□ -1.34
NEK3-201ENST00000550331 CDHR4A6H8M9 788 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 OR6C65A6NJZ3 312 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 LIPT2A6NK58 231 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 AQP7P3A6NL99 342 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 ATP6V1G2-DDX39BF2Z307 99 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 PDE5AO76074 875 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 AKR7A3O95154 331 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 VAMP5O95183 116 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 C1QCP02747 245 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 PGRP06401 933 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 ALDOCP09972 364 aaKnown RBP6.65□□□□□ -1.34
NEK3-201ENST00000550331 IGHV4-31P0DP07 118 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 NR2F1P10589 423 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 IL7RP16871 459 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 USF1P22415 310 aaPredicted RBP6.65□□□□□ -1.34
NEK3-201ENST00000550331 CXCR1P25024 350 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 GZMKP49863 264 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 SRSF2Q01130 221 aaKnown RBP6.65□□□□□ -1.34
NEK3-201ENST00000550331 CEACAM7Q14002 265 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 ZSWIM7Q19AV6 140 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 SWI5Q1ZZU3 235 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 C3orf36Q3SXR2 165 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 MRPL2Q5T653 305 aaKnown RBP6.65□□□□□ -1.34
NEK3-201ENST00000550331 C9orf135Q5VTT2 229 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 CYB5R2Q6BCY4 276 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 SPATA19Q7Z5L4 167 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 PEX5LQ8IYB4 626 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 MREGQ8N565 214 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 ZIC4Q8N9L1 334 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 HTRA1Q92743 480 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 TRIM44Q96DX7 344 aaPredicted RBP6.65□□□□□ -1.34
NEK3-201ENST00000550331 TEX37Q96LM6 180 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 ZNF385AQ96PM9 386 aaKnown RBP6.65□□□□□ -1.34
NEK3-201ENST00000550331 OR52E6Q96RD3 313 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 SORT1Q99523 831 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 KATNB1Q9BVA0 655 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 C1QTNF6Q9BXI9 259 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 BEX2Q9BXY8 128 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 SHARPINQ9H0F6 387 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 MYOZ1Q9NP98 299 aaPredicted RBP6.65□□□□□ -1.34
NEK3-201ENST00000550331 AIG1Q9NVV5 245 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 TMEM45AQ9NWC5 275 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 CALML5Q9NZT1 146 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 P2RX2Q9UBL9 471 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 MOKQ9UQ07 419 aa6.65□□□□□ -1.34
NEK3-201ENST00000550331 DSPPQ9NZW4 1301 aa6.65□□□□□ -1.35
NEK3-201ENST00000550331 DYSFO75923 2080 aa6.65□□□□□ -1.35
NEK3-201ENST00000550331 MALRD1Q5VYJ5 2156 aa6.65□□□□□ -1.35
NEK3-201ENST00000550331 ARPC4-TTLL3A0A0A6YYG9 625 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 IGHV1-18A0A0C4DH31 117 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 A8MVM7 634 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 VWC2LB2RUY7 222 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 ZNF587BE7ETH6 402 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 RFXANKO14593 260 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 RGS16O15492 202 aaPredicted RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 LMX1BO60663 402 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 RGS9O75916 674 aaPredicted RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 KRT33AO76009 404 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 KRT75O95678 551 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 CRYAAP02489 173 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 ZNF16P17020 682 aaPredicted RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 BGNP21810 368 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 CDKN2CP42773 168 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 NR4A2P43354 598 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 PDLIM4P50479 330 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 CRISP3P54108 245 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 UFM1P61960 85 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 SNRPD2P62316 118 aaKnown RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 STX3Q13277 289 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 OR7A5Q15622 319 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 MAPK11Q15759 364 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 EFNB3Q15768 340 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 MST1LQ2TV78 715 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 KRT71Q3SY84 523 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 LIN52Q52LA3 116 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 HIKESHIQ53FT3 197 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 COX20Q5RI15 118 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 RNF220Q5VTB9 566 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms