RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 V9GY05 133 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 M0R082 166 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 ZNF593O00488 134 aaPredicted RBP13.81□□□□□ -0.2
CUX1-214ENST00000550008 LCN1P31025 176 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 PCBP4P57723 403 aaKnown RBP13.81□□□□□ -0.2
CUX1-214ENST00000550008 CAMK2DQ13557 499 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 UBE3DQ7Z6J8 389 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 CADM3Q8N126 398 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 OR4C3Q8NH37 302 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 METTL8Q9H825 291 aaKnown RBP13.81□□□□□ -0.2
CUX1-214ENST00000550008 NOX4Q9NPH5 578 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 RNF215Q9Y6U7 377 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 EFCAB7A8K855 629 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 SPINT1O43278 529 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 ADAM23O75077 832 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 P04436 131 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 PM20D2Q8IYS1 436 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 CCDC107Q8WV48 283 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 DDIT4LQ96D03 193 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 YIPF6Q96EC8 236 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 EMC6Q9BV81 110 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 CDCA4Q9BXL8 241 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 MED17Q9NVC6 651 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 PISDQ9UG56 409 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 SCP2D1Q9UJQ7 156 aa13.81□□□□□ -0.2
CUX1-214ENST00000550008 CD14P08571 375 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 HSD17B7P56937 341 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 DUSP8Q13202 625 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 KIRREL2Q6UWL6 708 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 ESPNLQ6ZVH7 1005 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 BCORP1Q8N888 145 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 ZNF566Q969W8 418 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 WDR34Q96EX3 536 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 C11orf54Q9H0W9 315 aaPredicted RBP13.8□□□□□ -0.2
CUX1-214ENST00000550008 ISG20L2Q9H9L3 353 aaKnown RBP13.8□□□□□ -0.2
CUX1-214ENST00000550008 C20orf141Q9NUB4 165 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 CHST2Q9Y4C5 530 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 LOC285556D6RIA3 1793 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 ZNF432O94892 652 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 SRFP11831 508 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 CAPZBP47756 277 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 INSL4Q14641 139 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 NR0B2Q15466 257 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 ZMAT1Q5H9K5 638 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
CUX1-214ENST00000550008 SLC46A1Q96NT5 459 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 ZMAT3Q9HA38 289 aaKnown RBP13.8□□□□□ -0.2
CUX1-214ENST00000550008 RANGRFQ9HD47 186 aaPredicted RBP13.8□□□□□ -0.2
CUX1-214ENST00000550008 RCE1Q9Y256 329 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 TMEM269A0A1B0GVZ9 245 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 FZD7O75084 574 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 AMY2AP04746 511 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 KIR2DL1P43626 348 aaPredicted RBP13.8□□□□□ -0.2
CUX1-214ENST00000550008 RPS15P62841 145 aaKnown RBP13.8□□□□□ -0.2
CUX1-214ENST00000550008 FABP5Q01469 135 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 SFXN4Q6P4A7 337 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 DHRS4L2Q6PKH6 230 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 LGALS14Q8TCE9 139 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 STACQ99469 402 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 DPCDQ9BVM2 203 aaPredicted RBP13.8□□□□□ -0.2
CUX1-214ENST00000550008 CST11Q9H112 138 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 MCCC2Q9HCC0 563 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 RABL2BQ9UNT1 228 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 OTOFQ9HC10 1997 aa13.8□□□□□ -0.2
CUX1-214ENST00000550008 TMED7-TICAM2A0A0A6YYA0 188 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 A0A0B4J203 849 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 ARPC1BO15143 372 aaKnown RBP13.79□□□□□ -0.2
CUX1-214ENST00000550008 ZFAND5O76080 213 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 UGT2B10P36537 528 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 P4HA3Q7Z4N8 544 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 STRADBQ9C0K7 418 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 PPIL3Q9H2H8 161 aaKnown RBP13.79□□□□□ -0.2
CUX1-214ENST00000550008 PRDM9Q9NQV7 894 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 ACOXLQ9NUZ1 547 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 FKBP14Q9NWM8 211 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 TMED7Q9Y3B3 224 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 CACNG2Q9Y698 323 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 ZSCAN5BA6NJL1 495 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 SIGLEC6O43699 453 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 MPIG6BO95866 241 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 FGFBP1Q14512 234 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 TRIM61Q5EBN2 209 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 PRSS45Q7RTY3 260 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 RDH10Q8IZV5 341 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 C15orf40Q8WUR7 153 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 EDAQ92838 391 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 CCDC74AQ96AQ1 378 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 PFDN2Q9UHV9 154 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 A0A1W2PPV9 198 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 FFAR1O14842 300 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 SCGB1D2O95969 90 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 CRABP1P29762 137 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 HNRNPFP52597 415 aaKnown RBP13.79□□□□□ -0.2
CUX1-214ENST00000550008 NKAIN1Q4KMZ8 207 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 C9orf135Q5VTT2 229 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 SFXN2Q96NB2 322 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 NEDD4LQ96PU5 975 aa13.79□□□□□ -0.2
CUX1-214ENST00000550008 RGPD3A6NKT7 1758 aaPredicted RBP13.78□□□□□ -0.2
CUX1-214ENST00000550008 TEX13DA0A0J9YY54 714 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms