RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MALT1Q9UDY8 824 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 ZNF281Q9Y2X9 895 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 HDGFL3Q9Y3E1 203 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 CHST2Q9Y4C5 530 aa10.67□□□□□ -0.7
DDX54-206ENST00000549271 HEATR1Q9H583 2144 aaKnown RBP10.67□□□□□ -0.7
DDX54-206ENST00000549271 FAM157AC9JC47 383 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 DBIP07108 87 aaKnown RBP10.66□□□□□ -0.7
DDX54-206ENST00000549271 BMP2P12643 396 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 IL7RP16871 459 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 SRP14P37108 136 aaKnown RBP10.66□□□□□ -0.7
DDX54-206ENST00000549271 ACAA2P42765 397 aaKnown RBP10.66□□□□□ -0.7
DDX54-206ENST00000549271 PDLIM4P50479 330 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 EPS8Q12929 822 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 AGKQ53H12 422 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 LRIF1Q5T3J3 769 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 MRPL2Q5T653 305 aaKnown RBP10.66□□□□□ -0.7
DDX54-206ENST00000549271 B3GLCTQ6Y288 498 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 GRINAQ7Z429 371 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 PEX5LQ8IYB4 626 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 FBXL14Q8N1E6 418 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 C10orf111Q8N326 155 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 ZNF563Q8TA94 476 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 PIGXQ8TBF5 258 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 WDR60Q8WVS4 1066 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 APH1AQ96BI3 265 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 C3orf49Q96BT1 292 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 ZHX1-C8orf76Q96EF9 292 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 TMEM19Q96HH6 336 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 PIMREGQ9BSJ6 248 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 ZNF385DQ9H6B1 395 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 TMEM45AQ9NWC5 275 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 P2RX2Q9UBL9 471 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 CHRNA9Q9UGM1 479 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 TRAPPC4Q9Y296 219 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 NOSIPQ9Y314 301 aaKnown RBP10.66□□□□□ -0.7
DDX54-206ENST00000549271 SLC25A15Q9Y619 301 aa10.66□□□□□ -0.7
DDX54-206ENST00000549271 TRBV5-3A0A0A0MS03 114 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 A0A0G2JPF8 293 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 CDHR4A6H8M9 788 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 HNRNPCL2B2RXH8 293 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 HNRNPCL3B7ZW38 293 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 PDLIM1O00151 329 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 NR5A2O00482 541 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 FAAHO00519 579 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 HNRNPCL1O60812 293 aaKnown RBP10.65□□□□□ -0.7
DDX54-206ENST00000549271 EDF1O60869 148 aaKnown RBP10.65□□□□□ -0.7
DDX54-206ENST00000549271 BCHEP06276 602 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 GKN3PP0CG01 181 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 HNRNPCL4P0DMR1 293 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 ZNF23P17027 643 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 CD40P25942 277 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 NTF4P34130 210 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 CRISP3P54108 245 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 H3F3AP84243 136 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 GABRA6Q16445 453 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 RPS26P11Q5JNZ5 115 aaPredicted RBP10.65□□□□□ -0.7
DDX54-206ENST00000549271 OR7E24Q6IFN5 339 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 KLHL17Q6TDP4 642 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 ZNF836Q6ZNA1 936 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 CLIP4Q8N3C7 705 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 OR52P1PQ8NH57 321 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 GCDHQ92947 438 aaPredicted RBP10.65□□□□□ -0.7
DDX54-206ENST00000549271 MAL2Q969L2 176 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 ARL5BQ96KC2 179 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 OR11A1Q9GZK7 315 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 ASB6Q9NWX5 421 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 THUMPD1Q9NXG2 353 aaKnown RBP10.65□□□□□ -0.7
DDX54-206ENST00000549271 TAS2R16Q9NYV7 291 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 CALML5Q9NZT1 146 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 VAPAQ9P0L0 249 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 TMEFF2Q9UIK5 374 aaPredicted RBP10.65□□□□□ -0.7
DDX54-206ENST00000549271 OSGIN1Q9UJX0 560 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 GMEB1Q9Y692 573 aa10.65□□□□□ -0.7
DDX54-206ENST00000549271 NBEAL2Q6ZNJ1 2754 aa10.65□□□□□ -0.71
DDX54-206ENST00000549271 TMED7-TICAM2A0A0A6YYA0 188 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 CIB4A0PJX0 185 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 TMEM72A0PK05 275 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 CFAP73A6NFT4 308 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 MRPL33O75394 65 aaKnown RBP10.64□□□□□ -0.71
DDX54-206ENST00000549271 RAD51DO75771 328 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 TFPIP10646 304 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 SLC1A3P43003 542 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 HTR3AP46098 478 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 FABP6P51161 128 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 MAP2K6P52564 334 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 SPOCK1Q08629 439 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 FADDQ13158 208 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 GNA13Q14344 377 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 PRAMEF8Q5VWM4 474 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 PRAMEF7Q5VXH5 474 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 ZNF544Q6NX49 715 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 DLEU7Q6UYE1 221 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 DEF8Q6ZN54 512 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 UBE2J2Q8N2K1 259 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 PIAS4Q8N2W9 510 aaPredicted RBP10.64□□□□□ -0.71
DDX54-206ENST00000549271 C17orf78Q8N4C9 275 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 C1orf162Q8NEQ5 155 aaPredicted RBP10.64□□□□□ -0.71
DDX54-206ENST00000549271 FAM216AQ8WUB2 273 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 DNAJA3Q96EY1 480 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 BOD1Q96IK1 185 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms