RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PPP1R14CQ8TAE6 165 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 LMX1AQ8TE12 382 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CYGBQ8WWM9 190 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TMEM234Q8WY98 164 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 NABP1Q96AH0 204 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 PKP2Q99959 881 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 NDC1Q9BTX1 674 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CACYBPQ9HB71 228 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 VNN3Q9NY84 501 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TREM2Q9NZC2 230 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 EMC3Q9P0I2 261 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 OSGIN1Q9UJX0 560 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 ANTXRLA6NF34 631 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 OR6C6A6NF89 314 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TMEM150CB9EJG8 249 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TNFRSF13BO14836 293 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SUV39H1O43463 412 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 ZIC3O60481 467 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 H6PDO95479 791 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 KLK1P06870 262 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 NR2F1P10589 423 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 BMXP51813 675 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 ATXN3P54252 364 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 RAG2P55895 527 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TARDBPQ13148 414 aaKnown RBP eCLIP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 PTGR1Q14914 329 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 LARS2Q15031 903 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 RNPS1Q15287 305 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 YIF1BQ5BJH7 314 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TCHHL1Q5QJ38 904 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 KIRREL2Q6UWL6 708 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 ENPP6Q6UWR7 440 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 DGAT2L6Q6ZPD8 337 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TRMT1LQ7Z2T5 733 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 KRTCAP2Q8N6L1 136 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 OR11G2Q8NGC1 345 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CT55Q8WUE5 264 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 N4BP2L2Q92802 583 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 MYOCQ99972 504 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SLC6A17Q9H1V8 727 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SLC9A8Q9Y2E8 581 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 LOXL2Q9Y4K0 774 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 PRAMEF33A0A0G2JMD5 474 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 AHRRA9YTQ3 701 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 GTPBP1O00178 669 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CCL22O00626 93 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SLC22A1O15245 554 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 PRAMEF10O60809 474 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 WISP1O95388 367 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 BCL10O95999 233 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CASP3P42574 277 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 LHX2P50458 406 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 MAZP56270 477 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 AMZ1Q400G9 498 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 VASNQ6EMK4 673 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SLC16A12Q6ZSM3 486 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 C8orf86Q6ZUL3 223 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TAF8Q7Z7C8 310 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 FAM46DQ8NEK8 389 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 MOSPD2Q8NHP6 518 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 ASB15Q8WXK1 588 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 PRAP1Q96NZ9 151 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 DGAT2Q96PD7 388 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 SLC38A3Q99624 504 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 CMKLR1Q99788 373 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 TXNIPQ9H3M7 391 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 GSX1Q9H4S2 264 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 HSF4Q9ULV5 492 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 NOP16Q9Y3C1 178 aaKnown RBP4.38□□□□□ -1.71
SCAF11-212ENST00000549162 ANGPTL3Q9Y5C1 460 aa4.38□□□□□ -1.71
SCAF11-212ENST00000549162 PLPP3O14495 311 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 RAD1O60671 282 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CYP7B1O75881 506 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CBX6O95503 412 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 BMP4P12644 408 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CTSEP14091 401 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 RAB6AP20340 208 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 NPR2P20594 1047 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 MAGP20916 626 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 SLC13A2Q13183 592 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 C16orf72Q14CZ0 275 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 KCNJ8Q15842 424 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 AARDQ4LEZ3 155 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 DMKNQ6E0U4 476 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ELP2Q6IA86 826 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PWWP2BQ6NUJ5 590 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PAQR6Q6TCH4 344 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 C20orf204Q6ZNR8 217 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 GATAD2AQ86YP4 633 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 TIGD4Q8IY51 512 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 DYDC1Q8WWB3 177 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PNPLA2Q96AD5 504 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PHF21BQ96EK2 531 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PTCHD1Q96NR3 888 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 PSMG3-AS1Q96PY0 264 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 ADI1Q9BV57 179 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 SPRTNQ9H040 489 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-212ENST00000549162 FGF21Q9NSA1 209 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 CTSFQ9UBX1 484 aa4.37□□□□□ -1.71
SCAF11-212ENST00000549162 OPN4Q9UHM6 478 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms