RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TMEM45BQ96B21 275 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 ARL5BQ96KC2 179 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 ZNF385DQ9H6B1 395 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 TAS2R1Q9NYW7 299 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 CRNNQ9UBG3 495 aaPredicted RBP11.76□□□□□ -0.53
CDX2-202ENST00000548877 UPB1Q9UBR1 384 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 CHRNA9Q9UGM1 479 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 BAIAP2L1Q9UHR4 511 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 FAF1Q9UNN5 650 aaPredicted RBP11.76□□□□□ -0.53
CDX2-202ENST00000548877 PCDHB14Q9Y5E9 798 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 DNAJC15Q9Y5T4 150 aa11.76□□□□□ -0.53
CDX2-202ENST00000548877 PIP5K1BO14986 540 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 GSC2O15499 205 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 MGRN1O60291 552 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 EIF1BO60739 113 aaKnown RBP11.75□□□□□ -0.53
CDX2-202ENST00000548877 CIB2O75838 187 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 GUSBP08236 651 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 IDO1P14902 403 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 DAOP14920 347 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 MRPL19P49406 292 aaKnown RBP11.75□□□□□ -0.53
CDX2-202ENST00000548877 SCGB2A2Q13296 93 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 SLC17A1Q14916 467 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 PRR31Q5SQ13 230 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 OGFOD2Q6N063 350 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 C16orf89Q6UX73 402 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 CASP12Q6UXS9 341 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 NATD1Q8N6N6 113 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 ZNF614Q8N883 585 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 FAM169BQ8N8A8 192 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 OR2T11Q8NH01 316 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 MOAP1Q96BY2 351 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 TUBGCP3Q96CW5 907 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 PPP1R36Q96LQ0 422 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 SLC38A2Q96QD8 506 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 OR7D2Q96RA2 312 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 DOK1Q99704 481 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 PIF1Q9H611 641 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 EFCAB1Q9HAE3 211 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 TMEM181Q9P2C4 612 aa11.75□□□□□ -0.53
CDX2-202ENST00000548877 BBIP1A8MTZ0 92 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 B4DSR2 109 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 LSM1O15116 133 aaKnown RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 SCAMP2O15127 329 aaKnown RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 UGT2B17O75795 530 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 AK1P00568 194 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 CSTAP01040 98 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 IGLV1-44P01699 117 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 CRYAAP02489 173 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 OR4A8P0C604 315 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 TFPIP10646 304 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 EFNA1P20827 205 aaPredicted RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 PGM1P36871 562 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 RPL3P39023 403 aaKnown RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 POU3F1Q03052 451 aaPredicted RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 LGALS3BPQ08380 585 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 MAD2L1Q13257 205 aaPredicted RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 C9orf135Q5VTT2 229 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 KLHL24Q6TFL4 600 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 EIF3MQ7L2H7 374 aaKnown RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 GRINAQ7Z429 371 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 ADGRG3Q86Y34 549 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 POMGNT2Q8NAT1 580 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 RBM15BQ8NDT2 890 aaKnown RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 NUP37Q8NFH4 326 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 CLHC1Q8NHS4 586 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 TSPEARQ8WU66 669 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 PPP3R2Q96LZ3 170 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 CADM1Q9BY67 442 aaKnown RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 TUBB1Q9H4B7 451 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 METTL17Q9H7H0 456 aaPredicted RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 ZNF442Q9H7R0 627 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 AKTIPQ9H8T0 292 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 MOV10Q9HCE1 1003 aaKnown RBP11.74□□□□□ -0.53
CDX2-202ENST00000548877 CTPS2Q9NRF8 586 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 SPEF1Q9Y4P9 236 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 PTGDR2Q9Y5Y4 395 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
CDX2-202ENST00000548877 ARPC4-TTLL3A0A0A6YYG9 625 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 CENPVL1A0A0U1RR11 272 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 DUXAA6NLW8 204 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 FCMRO60667 390 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 STX11O75558 287 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 IGFBP1P08833 259 aaPredicted RBP11.73□□□□□ -0.53
CDX2-202ENST00000548877 LAMP1P11279 417 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 BCKDHAP12694 445 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 HILS1P60008 231 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 RPL38P63173 70 aaKnown RBP11.73□□□□□ -0.53
CDX2-202ENST00000548877 ACTG1P63261 375 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 SLC35A1P78382 337 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 NAAAQ02083 359 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 TP53BP2Q13625 1128 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 SNCBQ16143 134 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 ARHGAP11BQ3KRB8 267 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 ATP6AP1LQ52LC2 224 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 XKR7Q5GH72 579 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 ANKRD16Q6P6B7 361 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 RINLQ6ZS11 566 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 MIER2Q8N344 545 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms