RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 TEX51A0A1B0GUA7 166 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 GPR89AB7ZAQ6 455 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 H7C0S8 307 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 MBTPS2O43462 519 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 FADS1O60427 444 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 SDC3O75056 442 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 CYB5AP00167 134 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 KLKB1P03952 638 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 GPR89BP0CG08 455 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TFPIP10646 304 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 PSMB1P20618 241 aaKnown RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 PSMB5P28074 263 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 MMP12P39900 470 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 AGFG1P52594 562 aaKnown RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 HCCSP53701 268 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ZP2Q05996 745 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 RAB40BQ12829 278 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 GK2Q14410 553 aaPredicted RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 SSX1Q16384 188 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 SYT14P1Q58G82 188 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TCEAL5Q5H9L2 206 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 PLEKHS1Q5SXH7 462 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 METTL11BQ5VVY1 283 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 LCN10Q6JVE6 187 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 LRRC28Q86X40 367 aaPredicted RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 CLDN22Q8N7P3 220 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 LSMEM1Q8N8F7 131 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 OR5AR1Q8NGP9 310 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 HAVCR2Q8TDQ0 301 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ASB11Q8WXH4 323 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 THAP4Q8WY91 577 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 GLYATL1Q969I3 302 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 DPH7Q9BTV6 452 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 EIF5A2Q9GZV4 153 aaKnown RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 SYT4Q9H2B2 425 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 MVB12BQ9H7P6 319 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 NIT2Q9NQR4 276 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 BIN3Q9NQY0 253 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 NTNG1Q9Y2I2 539 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 CCL27Q9Y4X3 112 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 BDP1A6H8Y1 2624 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TRABD2BA6NFA1 517 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TMEM202A6NGA9 273 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 DUXAA6NLW8 204 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ADAM12O43184 909 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 SC5DO75845 299 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 DCNP07585 359 aaKnown RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ACP2P11117 423 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 HOXB9P17482 250 aaPredicted RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 GABRB1P18505 474 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 GABRA5P31644 462 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 MC3RP41968 323 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 RBM34P42696 430 aaKnown RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 PNLIPRP1P54315 467 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 RAB5BP61020 215 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 PDGFRLQ15198 375 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 LY6G5CQ5SRR4 150 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 OTPQ5XKR4 325 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TEX261Q6UWH6 196 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 GAREM2Q75VX8 874 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ESX1Q8N693 406 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 NANOGP1Q8N7R0 232 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ZNF480Q8WV37 535 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ZFPM2Q8WW38 1151 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 CHFRQ96EP1 664 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 LRRC46Q96FV0 321 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 C5orf34Q96MH7 638 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 OR2M2Q96R28 347 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 C12orf57Q99622 126 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 PDCD1LG2Q9BQ51 273 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TMEM43Q9BTV4 400 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 RSPO3Q9BXY4 272 aaPredicted RBP5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TRIM2Q9C040 744 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TMEM231Q9H6L2 316 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 CSNK1G1Q9HCP0 422 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 RPS10P5Q9NQ39 176 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ASH2LQ9UBL3 628 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 ACSL5Q9ULC5 683 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 U3KQ87 197 aa5.06□□□□□ -1.6
LIMA1-203ENST00000547825 TVP23AA6NH52 213 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 UNC119BA6NIH7 251 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 F5H5P2 479 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 RNASET2O00584 256 aaKnown RBP5.05□□□□□ -1.6
LIMA1-203ENST00000547825 MOSPD3O75425 235 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 ETHE1O95571 254 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 HBQ1P09105 142 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 EPCAMP16422 314 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 ZNF10P21506 573 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-203ENST00000547825 ELAVL4P26378 380 aaKnown RBP5.05□□□□□ -1.6
LIMA1-203ENST00000547825 GABRA3P34903 492 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 RFX2P48378 723 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 ART1P52961 327 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 ILKQ13418 452 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 GPM6BQ13491 265 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 DYRK1AQ13627 763 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 AANATQ16613 207 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 GXYLT1Q4G148 440 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 PHF19Q5T6S3 580 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 IRAK1BP1Q5VVH5 260 aa5.05□□□□□ -1.6
LIMA1-203ENST00000547825 SFXN4Q6P4A7 337 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms