RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ZNHIT3Q15649 155 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 MLF2Q15773 248 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 AANATQ16613 207 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 DUSP5Q16690 384 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 LGALSLQ3ZCW2 172 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 EMC4Q5J8M3 183 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 MRPL2Q5T653 305 aaKnown RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 FAAH2Q6GMR7 532 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 FDX2Q6P4F2 183 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 GLDNQ6ZMI3 551 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 Q6ZS46 218 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 OVCH2Q7RTZ1 564 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 MAMDC2Q7Z304 686 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 CDH26Q8IXH8 852 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 FBXL6Q8N531 539 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 COX18Q8N8Q8 333 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 AMER3Q8N944 861 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 SLC16A11Q8NCK7 471 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 OR7G2Q8NG99 324 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 OR4E2Q8NGC2 313 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 OR2T35Q8NGX2 323 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 OR2T4Q8NH00 348 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 SNX33Q8WV41 574 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 LIPHQ8WWY8 451 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 EDAQ92838 391 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 RBPMSQ93062 196 aaKnown RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 HAVCR1Q96D42 359 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 RSPRY1Q96DX4 576 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 OMA1Q96E52 524 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 TOE1Q96GM8 510 aaKnown RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 AIFM2Q9BRQ8 373 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 YIPF4Q9BSR8 244 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 DPH1Q9BZG8 443 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 DNTTIP1Q9H147 329 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 NKX2-4Q9H2Z4 354 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 MTG2Q9H4K7 406 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 KLHL31Q9H511 634 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 MYOZ1Q9NP98 299 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 MKKSQ9NPJ1 570 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 HCFC1R1Q9NWW0 138 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 MED11Q9P086 117 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 KCMF1Q9P0J7 381 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 UPB1Q9UBR1 384 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 CHRNA9Q9UGM1 479 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 APOBEC3BQ9UH17 382 aaKnown RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 DAPP1Q9UN19 280 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 SLC22A7Q9Y694 548 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 SIRT4Q9Y6E7 314 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-225ENST00000545920 KCNE3Q9Y6H6 103 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 COL4A3Q01955 1670 aa5.94□□□□□ -1.46
SNHG1-225ENST00000545920 TRAV6A0A075B6T7 132 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 TBC1D3IA0A087WXS9 549 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 A0A0A6YYH2 397 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 hCG_1807616A0A1W2PRN6 198 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 TCRBV16S1A1N1A0A5B0 115 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 PLSCR5A0PG75 271 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SMIM30A4D0T7 59 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 A6NJ64 397 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 PRRT4C9JH25 899 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 I3L521 148 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 PIP5K1CO60331 668 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 FCMRO60667 390 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 NDUFB6O95139 128 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SLC2A10O95528 541 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 GPR75O95800 540 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 TIMP1P01033 207 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 CSF1P09603 554 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 LINC00271P0C7V0 271 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 TFPIP10646 304 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 PPP3CBP16298 524 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 EPCAMP16422 314 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 CTRB1P17538 263 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 ATF1P18846 271 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SRMP19623 302 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 PRKACBP22694 351 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 HTR2AP28223 471 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 AGTR1P30556 359 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 ART1P52961 327 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 BLVRAP53004 296 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 BTN3A2P78410 334 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 DEFB103AP81534 67 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 DGCR2P98153 550 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SLC3A1Q07837 685 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 FOXD4Q12950 439 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SGCGQ13326 291 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 OPCMLQ14982 345 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 RBMS2Q15434 407 aaKnown RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 CST6Q15828 149 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF141Q15928 474 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 ST3GAL2Q16842 350 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 NDUFAF6Q330K2 333 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 POM121L1PQ3SYA9 428 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 NHLRC3Q5JS37 347 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 AGBL4Q5VU57 503 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 C18orf63Q68DL7 685 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF626Q68DY1 528 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 CTRB2Q6GPI1 263 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 FAM180BQ6P0A1 224 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 LPCAT3Q6P1A2 487 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms