RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TANGO2Q6ICL3 276 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 PRICKLE2Q7Z3G6 844 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 FAM26EQ8N5C1 309 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 OR6T1Q8NGN1 323 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 DVL2O14641 736 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 RAD1O60671 282 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 NFYAP23511 347 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-209ENST00000545689 LIPAP38571 399 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 FXYD4P59646 89 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 ERVK-16P61578 105 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 RAB31Q13636 194 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 ALKBH1Q13686 389 aaKnown RBP11.61□□□□□ -0.55
COL4A6-209ENST00000545689 PEA15Q15121 130 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 OVCH1Q7RTY7 1134 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 OR6F1Q8NGZ6 308 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 TMEM255BQ8WV15 326 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 MCOLN1Q9GZU1 580 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 ENKD1Q9H0I2 346 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 STEAP1Q9UHE8 339 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 RHBDD3Q9Y3P4 386 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 LRIT2A6NDA9 550 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 TLCD2A6NGC4 264 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 TGM6O95932 706 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 MRPL19P49406 292 aaKnown RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SPOCK1Q08629 439 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 C17orf67Q0P5P2 114 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 OR7E24Q6IFN5 339 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 FAM111BQ6SJ93 734 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 CD300LGQ6UXG3 332 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ANKRD33Q7Z3H0 272 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 S100PBPQ96BU1 408 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SENP5Q96HI0 755 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 TMEM82A0PJX8 343 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 DPM1O60762 260 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 GLCEO94923 617 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 CHATP28329 748 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 GAB1Q13480 694 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 YOD1Q5VVQ6 348 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 TRAPPC6BQ86SZ2 158 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 FAM109AQ8N4B1 249 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 LGALS14Q8TCE9 139 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SGPP1Q9BX95 441 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 VN1R3Q9BXE9 311 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 BOKQ9UMX3 212 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 EIF4E2O60573 245 aaKnown RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 CNOT4O95628 575 aaKnown RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 HLA-AP01891 365 aaKnown RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 OR8G3PP0DMU2 310 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 DDOSTP39656 456 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ECI1P42126 302 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 CAV2P51636 162 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 LIM2P55344 173 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF740Q8NDX6 193 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SPPL3Q8TCT6 385 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF649Q9BS31 505 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF286AQ9HBT8 521 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 FBXO8Q9NRD0 319 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ACER3Q9NUN7 267 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SLC22A23A1A5C7 686 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 PAPLNO95428 1278 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 MMP11P24347 488 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 TRIM23P36406 574 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 BDH1Q02338 343 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 BCL2A1Q16548 175 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 PGAP1Q75T13 922 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SLC25A46Q96AG3 418 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SLCO4A1Q96BD0 722 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ZDHHC5Q9C0B5 715 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 CD14P08571 375 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SNRPBP14678 240 aaKnown RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 TGFBR3Q03167 851 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 SRYQ05066 204 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ZP2Q05996 745 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 FGL2Q14314 439 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 RSC1A1Q92681 617 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ULBP2Q9BZM5 246 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 RANGRFQ9HD47 186 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 NOX4Q9NPH5 578 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 RPH3AQ9Y2J0 694 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-209ENST00000545689 ATG4BQ9Y4P1 393 aa11.6□□□□□ -0.55
COL4A6-209ENST00000545689 TMED7-TICAM2A0A0A6YYA0 188 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 SSX5O60225 188 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 SNAPINO95295 136 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 F13BP05160 661 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 GCH1P30793 250 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 EIF1P41567 113 aaKnown RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 PLCXD3Q63HM9 321 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 TMEM185AQ8NFB2 350 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 KCNG3Q8TAE7 436 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 UBQLN3Q9H347 655 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MED20Q9H944 212 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MYEF2Q9P2K5 600 aaKnown RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MUTYHQ9UIF7 546 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 KIF25Q9UIL4 384 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 TMED7Q9Y3B3 224 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 IFNA4P05014 189 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 NAGAP17050 411 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 FKBP2P26885 142 aaKnown RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 GPR157Q5UAW9 335 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 NPRL2Q8WTW4 380 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms