RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PLPPR2Q96GM1 343 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 HOPXQ9BPY8 73 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-216ENST00000544996 TAS2R16Q9NYV7 291 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 MALT1Q9UDY8 824 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 B3GALT5Q9Y2C3 310 aa13.89□□□□□ -0.19
CCDC78-216ENST00000544996 IGKV1D-42A0A075B6H8 117 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 A0A1W2PPR1 153 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 ELOVL7A1L3X0 281 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 DYNC1I1O14576 645 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 SNX3O60493 162 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 KRT33AO76009 404 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 DRD4P21917 467 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 P2RY4P51582 365 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 GNGT1P63211 74 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 TGFBR3Q03167 851 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 ENTPD8Q5MY95 495 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 TIMM23BQ5SRD1 257 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 OR7E24Q6IFN5 339 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 CREB3L2Q70SY1 520 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 H1FNTQ75WM6 255 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-216ENST00000544996 P3H2Q8IVL5 708 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 C10orf53Q8N6V4 93 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 ZNF433Q8N7K0 673 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-216ENST00000544996 ZIC4Q8N9L1 334 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 OR6S1Q8NH40 331 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 ZNF385AQ96PM9 386 aaKnown RBP13.88□□□□□ -0.19
CCDC78-216ENST00000544996 HS3ST6Q96QI5 342 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 FOXC2Q99958 501 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 TMEM43Q9BTV4 400 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 ESRP2Q9H6T0 727 aaKnown RBP13.88□□□□□ -0.19
CCDC78-216ENST00000544996 SH3GLB1Q9Y371 365 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 CORINQ9Y5Q5 1042 aa13.88□□□□□ -0.19
CCDC78-216ENST00000544996 TRAPPC13A5PLN9 417 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 OR5H1A6NKK0 313 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 CPSF4LA6NMK7 179 aaKnown RBP13.87□□□□□ -0.19
CCDC78-216ENST00000544996 M0R082 166 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 NDUFAB1O14561 156 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 CHP2O43745 196 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 RAD51DO75771 328 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 ATE1O95260 518 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 ZNF43P17038 809 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 GRPRP30550 384 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 NUDT2P50583 147 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 GYS2P54840 703 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 IL1RL1Q01638 556 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 C1DQ13901 141 aaKnown RBP13.87□□□□□ -0.19
CCDC78-216ENST00000544996 PPA1Q15181 289 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 TESK1Q15569 626 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 TSPO2Q5TGU0 170 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 ABHD12BQ7Z5M8 362 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-216ENST00000544996 TREML1Q86YW5 311 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 MICU2Q8IYU8 434 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 POMGNT2Q8NAT1 580 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 ZNF417Q8TAU3 575 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 ADAMTS16Q8TE57 1224 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 MBD6Q96DN6 1003 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 OXGR1Q96P68 337 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 ZNF587Q96SQ5 575 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-216ENST00000544996 ASPNQ9BXN1 380 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 PCDHAC1Q9H158 963 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 MYLK2Q9H1R3 596 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 UBTD1Q9HAC8 227 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 SLC7A10Q9NS82 523 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 USP22Q9UPT9 525 aa13.87□□□□□ -0.19
CCDC78-216ENST00000544996 OR6C65A6NJZ3 312 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 FZD7O75084 574 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 NQO1P15559 274 aaKnown RBP13.86□□□□□ -0.19
CCDC78-216ENST00000544996 LOXP28300 417 aaPredicted RBP13.86□□□□□ -0.19
CCDC78-216ENST00000544996 KDELR2P33947 212 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 CRYBA2P53672 197 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 LIPEQ05469 1076 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 NPTX1Q15818 432 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 ACKR1Q16570 336 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 LRRC23Q53EV4 343 aaPredicted RBP13.86□□□□□ -0.19
CCDC78-216ENST00000544996 HACD2Q6Y1H2 254 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 SPNS3Q6ZMD2 512 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 ZNF704Q6ZNC4 412 aaPredicted RBP13.86□□□□□ -0.19
CCDC78-216ENST00000544996 CARM1Q86X55 608 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 RBM45Q8IUH3 476 aaKnown RBP13.86□□□□□ -0.19
CCDC78-216ENST00000544996 EPHX4Q8IUS5 362 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 SLC15A3Q8IY34 581 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 KDM8Q8N371 416 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 LZICQ8WZA0 190 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 MPP4Q96JB8 637 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 SLCO5A1Q9H2Y9 848 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 CMTM6Q9NX76 183 aa13.86□□□□□ -0.19
CCDC78-216ENST00000544996 ANKRD17O75179 2603 aaKnown RBP13.85□□□□□ -0.19
CCDC78-216ENST00000544996 LOC102725191A0A1B0GVB3 256 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 GSTA4O15217 222 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 MT-ATP6P00846 226 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 CD3EP07766 207 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 CBLP22681 906 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 MPGP29372 298 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 PRDX6P30041 224 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 HOXC12P31275 282 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 SLC7A2P52569 658 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 PMS2P3Q13401 168 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 DEFB113Q30KQ7 82 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 CYBRD1Q53TN4 286 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 NIPAL3Q6P499 406 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms