RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	DUSP3	P51452	185 aa	Predicted RBP	2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	GPM6A	P51674	278 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	OXA1L	Q15070	435 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	PDK3	Q15120	406 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	DUSP7	Q16829	419 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	EXOC3L2	Q2M3D2	409 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	BOLA3	Q53S33	107 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	DMRTC1	Q5HYR2	192 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	C6orf89	Q6UWU4	347 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639		Q6ZN92	141 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	ZNF429	Q86V71	674 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	FAM133A	Q8N9E0	248 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639		Q8N9W7	124 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	FANK1	Q8TC84	345 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	UFD1	Q92890	307 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	TM4SF19	Q96DZ7	209 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	ITCH	Q96J02	903 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	OXGR1	Q96P68	337 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	MTMR9	Q96QG7	549 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	CLCC1	Q96S66	551 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	PARD6B	Q9BYG5	372 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	ROGDI	Q9GZN7	287 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	RNF167	Q9H6Y7	350 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	THUMPD1	Q9NXG2	353 aa	Known RBP	2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	SEC14L3	Q9UDX4	400 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	PRO0461	Q9UI25	63 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	PTBP2	Q9UKA9	531 aa	Known RBP	2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	WSB1	Q9Y6I7	421 aa		2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	RPAP1	Q9BWH6	1393 aa	Predicted RBP	2.68	□□□□□ -1.98
RAP1B-231	ENST00000544639	ARID1A	O14497	2285 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TRBV6-6	A0A0A6YYG2	114 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	C15orf38-AP3S2	A0A0A6YYH1	394 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	FAM166B	A8MTA8	275 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TNFSF13	O75888	250 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	OXSR1	O95747	527 aa	Predicted RBP	2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	MMP1	P03956	469 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	ZNF853	P0CG23	659 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	DBT	P11182	482 aa	Known RBP	2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TOP1	P11387	765 aa	Known RBP	2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	CRISP2	P16562	243 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	GLRA2	P23416	452 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	CCNC	P24863	283 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	IL12A	P29459	219 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	CCR1	P32246	355 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	CSNK1D	P48730	415 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	CCT3	P49368	545 aa	Known RBP	2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	LHX2	P50458	406 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	KLHL38	Q2WGJ6	581 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	MARCH8	Q5T0T0	291 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	AGBL2	Q5U5Z8	902 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TIFAB	Q6ZNK6	161 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	PAQR7	Q86WK9	346 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TMEM61	Q8N0U2	210 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	MDS2	Q8NDY4	140 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	NPB	Q8NG41	125 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	OR52H1	Q8NGJ2	320 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	NDRG1	Q92597	394 aa	Known RBP	2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	RNF185	Q96GF1	192 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TIMD4	Q96H15	378 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TMEM246	Q9BRR3	403 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TMEM43	Q9BTV4	400 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	CAPS2	Q9BXY5	557 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	ACTR6	Q9GZN1	396 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	GORASP2	Q9H8Y8	452 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	EML4	Q9HC35	981 aa	Known RBP	2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	MYOZ2	Q9NPC6	264 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	CCL28	Q9NRJ3	127 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	QPCTL	Q9NXS2	382 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	CLCF1	Q9UBD9	225 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639	TMCO1	Q9UM00	188 aa		2.67	□□□□□ -1.98
RAP1B-231	ENST00000544639		A0A0G2JN53	185 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	NKX2-6	A6NCS4	301 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	HSD17B6	O14756	317 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	MTX2	O75431	263 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	PRB2	P02812	416 aa	Predicted RBP	2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	CAPN1	P07384	714 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	GIP	P09681	153 aa	Predicted RBP	2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	CMA1	P23946	247 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	FMO3	P31513	532 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	GSS	P48637	474 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	GPM6B	Q13491	265 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	PDZK1	Q5T2W1	519 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	GPR157	Q5UAW9	335 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	ZSCAN25	Q6NSZ9	544 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	ZNF620	Q6ZNG0	422 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	PPP1R42	Q7Z4L9	355 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	OR51G1	Q8NGK1	321 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	OR5D13	Q8NGL4	314 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	RBM14	Q96PK6	669 aa	Known RBP	2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	NPAS2	Q99743	824 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	DEFB127	Q9H1M4	99 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	SRMS	Q9H3Y6	488 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	SIAE	Q9HAT2	523 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	NUFIP1	Q9UHK0	495 aa	Known RBP	2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	CDH9	Q9ULB4	789 aa		2.66	□□□□□ -1.98
RAP1B-231	ENST00000544639	MYO10	Q9HD67	2058 aa		2.65	□□□□□ -1.98
RAP1B-231	ENST00000544639	IGHV3-64D	A0A0J9YX35	117 aa		2.65	□□□□□ -1.99
RAP1B-231	ENST00000544639	RBMY1B	A6NDE4	496 aa	Known RBP	2.65	□□□□□ -1.99
RAP1B-231	ENST00000544639	RBMY1E	A6NEQ0	496 aa	Known RBP	2.65	□□□□□ -1.99
RAP1B-231	ENST00000544639	NBR2	O15453	112 aa		2.65	□□□□□ -1.99

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms