RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 BOD1Q96IK1 185 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF317Q96PQ6 595 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 DUX5Q96PT3 197 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 SLC38A2Q96QD8 506 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF300Q96RE9 604 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 DOK1Q99704 481 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 SLC30A2Q9BRI3 323 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 RTN4RQ9BZR6 473 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 NARFLQ9H6Q4 476 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF665Q9H7R5 613 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 PARPBPQ9NWS1 579 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 NMRK1Q9NWW6 199 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 PLEK2Q9NYT0 353 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 TREM2Q9NZC2 230 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 FLRT3Q9NZU0 649 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 UPB1Q9UBR1 384 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ZDHHC2Q9UIJ5 367 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 KCNE5Q9UJ90 142 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 NUP50Q9UKX7 468 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ACOT9Q9Y305 439 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 MED12LQ86YW9 2145 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 PKD1L1Q8TDX9 2849 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 PRKDCP78527 4128 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PPIAL4EA0A075B759 164 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 IGHV3-15A0A0B4J1V0 119 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PPIAL4CA0A0B4J2A2 164 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 IGHV1-18A0A0C4DH31 117 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 LOC100653049A0A140TA62 436 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 LOC102723971A0A1B0GUV8 181 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 A0A1W2PQD3 144 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 CCDC189A1A4V9 331 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 CLPSL1A2RUU4 121 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 SYCE1LA8MT33 242 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 SUPT3HB4E1H0 165 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 C9JVG2 144 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PPIAL4DF5H284 164 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 H3BNH8 94 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 M0R233 179 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PDLIM1O00151 329 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PPIHO43447 177 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PLPP2O43688 288 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ERLIN1O75477 346 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 SUPT3HO75486 399 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 KRT34O76011 436 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ZFPL1O95159 310 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 NDUFA7O95182 113 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 CLDN9O95484 217 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ESRRBO95718 433 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 OXSR1O95747 527 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 HSPA4LO95757 839 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 NUDT14O95848 222 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 IGHV3-9P01782 118 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ITGA5P08648 1049 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ADRA2AP08913 450 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PPIAL4FP0DN26 164 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 CD1DP15813 335 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 EDNRAP25101 427 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 SHC1P29353 583 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 MPGP29372 298 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PCGF2P35227 344 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 GSTM5P46439 218 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 KCNJ1P48048 391 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ATP4BP51164 291 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF134P52741 427 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 RAG2P55895 527 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 TAS2R39P59534 338 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 UBE2NP61088 152 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 RPL15P61313 204 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 LMO4P61968 165 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 NAAAQ02083 359 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PLP2Q04941 152 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 IFT88Q13099 833 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 DYRK1AQ13627 763 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 FRG1Q14331 258 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 HEPACAMQ14CZ8 416 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 SLC9A3R2Q15599 337 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 OR4D1Q15615 310 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 FAM189A2Q15884 450 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ZIK1Q3SY52 487 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 GLE1Q53GS7 698 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PLA1AQ53H76 456 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 FAM205BPQ63HN1 556 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 TTC19Q6DKK2 380 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ABLIM2Q6H8Q1 611 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ASPHD2Q6ICH7 369 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 METTL2BQ6P1Q9 378 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 RHOUQ7L0Q8 258 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 R3HCC1LQ7Z5L2 792 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 MTERF4Q7Z6M4 381 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ZC3HC1Q86WB0 502 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 TEX9Q8N6V9 391 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 KIR3DL3Q8N743 410 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 NAT8LQ8N9F0 302 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 L3MBTL4Q8NA19 623 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 OR7G2Q8NG99 324 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 CEP70Q8NHQ1 597 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 PIGXQ8TBF5 258 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 WDR20Q8TBZ3 569 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF75CPQ92670 426 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 EXT2Q93063 718 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms