RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 MAGEA2P43356 314 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 SLC16A1P53985 500 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 CHRNB3Q05901 458 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 FOXD4Q12950 439 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 ZNF74Q16587 644 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 FAM98BQ52LJ0 330 aaKnown RBP15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 TMEM201Q5SNT2 666 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 BTLAQ7Z6A9 289 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 C10orf53Q8N6V4 93 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 OR6K3Q8NGY3 331 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 MOGAT1Q96PD6 335 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 PSMG3-AS1Q96PY0 264 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 SF3B5Q9BWJ5 86 aaKnown RBP15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 JKAMPQ9P055 326 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 MED31Q9Y3C7 131 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 CORINQ9Y5Q5 1042 aa15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 KLF2Q9Y5W3 355 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-203ENST00000543002 A0A1W2PRQ8 180 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 NKX2-6A6NCS4 301 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 LRRN3E7EW58 273 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 M0R082 166 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 VAMP5O95183 116 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 CGAP01215 116 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 CD8BP10966 210 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 UMPSP11172 480 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 CBLP22681 906 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 DGCR6Q14129 220 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 SLC17A1Q14916 467 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 TMEM225Q6GV28 225 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 H1FNTQ75WM6 255 aaPredicted RBP15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 MAMDC2Q7Z304 686 aaPredicted RBP15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 ADGRG5Q8IZF4 528 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 ADPRHL1Q8NDY3 354 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 PFN4Q8NHR9 129 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 ZNF417Q8TAU3 575 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 ACOT11Q8WXI4 607 aaPredicted RBP15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 DHRS1Q96LJ7 313 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 ZNF347Q96SE7 839 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 ZNF587Q96SQ5 575 aaPredicted RBP15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 ASPNQ9BXN1 380 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 FKRPQ9H9S5 495 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 CHST11Q9NPF2 352 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 PLSCR4Q9NRQ2 329 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 EMC3Q9P0I2 261 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 C6orf203Q9P0P8 240 aaPredicted RBP15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 RASD1Q9Y272 281 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 B3GALT5Q9Y2C3 310 aa15.22■□□□□ 0.03
RABGGTA-203ENST00000543002 A0A087WUU8 490 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 HTR3EA5X5Y0 456 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 ENO4A6NNW6 628 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 EEF1E1-BLOC1S5C9J1V9 151 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 GPR171O14626 319 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 MSTNO14793 375 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 EEF1E1O43324 174 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 CLDN1O95832 211 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 CH25HO95992 272 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 ASCL1P50553 236 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 SMIM11AP58511 58 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 GABPB1Q06547 395 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 SLC46A3Q7Z3Q1 461 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 NUFIP2Q7Z417 695 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 SPATA24Q86W54 205 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 RNF113BQ8IZP6 322 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 SCAIQ8N9R8 606 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 SGTBQ96EQ0 304 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 C20orf141Q9NUB4 165 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 MRPL39Q9NYK5 338 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 SEC14L4Q9UDX3 406 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 PROCRQ9UNN8 238 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 DOPEY2Q9Y3R5 2298 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 TESMINQ9Y4I5 508 aa15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 USP9YO00507 2555 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-203ENST00000543002 TCRBV3S1A0A5B6 114 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 DHRS12A0PJE2 317 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 A1L4Q6 167 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 A8MXE2 369 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 PIP5K1CO60331 668 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 SMNDC1O75940 238 aaKnown RBP eCLIP15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 RAP2AP10114 183 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 HOXB6P17509 224 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 LSM11P83369 360 aaKnown RBP eCLIP15.2■□□□□ 0.023e-9■□□□□ 10.4
RABGGTA-203ENST00000543002 TFF3Q07654 80 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 PMS2P3Q13401 168 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 POU4F3Q15319 338 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 FBXL19-AS1Q494R0 122 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 FGD3Q5JSP0 725 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 ZNF730Q6ZMV8 503 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 MBOAT2Q6ZWT7 520 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 GALNT5Q7Z7M9 940 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 OR9K2Q8NGE7 335 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 SLC7A13Q8TCU3 470 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 CANT1Q8WVQ1 401 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 LIPHQ8WWY8 451 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 UTP4Q969X6 686 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 ZNF775Q96BV0 537 aaPredicted RBP15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 NANSQ9NR45 359 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 ZNF229Q9UJW7 825 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 FLVCR1Q9Y5Y0 555 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 CACNA1CQ13936 2221 aa15.2■□□□□ 0.02
RABGGTA-203ENST00000543002 SPTAN1Q13813 2472 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms