RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 DEFB133Q30KQ1 61 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 XKR7Q5GH72 579 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 SIAH3Q8IW03 269 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 EID2Q8N6I1 236 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 BBS1Q8NFJ9 593 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 TMEM106AQ96A25 262 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 TM4SF18Q96CE8 201 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 ARHGAP9Q9BRR9 750 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 VN1R3Q9BXE9 311 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 AMBRA1Q9C0C7 1298 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 A0A0U1RQK1 487 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.18□□□□□ -0.46
TNC-212ENST00000542877 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.18□□□□□ -0.46
TNC-212ENST00000542877 SERINC4A6NH21 518 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 OR6C65A6NJZ3 312 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 SHOXO15266 292 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 TAPBPO15533 448 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 KCNK2O95069 426 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 ESCO2Q56NI9 601 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 YIF1BQ5BJH7 314 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 COX20Q5RI15 118 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 OR10K1Q8NGX5 313 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 CHTF18Q8WVB6 975 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 FOXN4Q96NZ1 517 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 ENKD1Q9H0I2 346 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 C1orf198Q9H425 327 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 NCDNQ9UBB6 729 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 MYO10Q9HD67 2058 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 TRAPPC2LH3BP13 241 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 STK17BO94768 372 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 CD63P08962 238 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 CLDN12P56749 244 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 SF3B4Q15427 424 aaKnown RBP eCLIP12.18□□□□□ -0.46
TNC-212ENST00000542877 TMEM201Q5SNT2 666 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 OR14A16Q8NHC5 309 aa12.18□□□□□ -0.46
TNC-212ENST00000542877 QRSL1Q9H0R6 528 aaKnown RBP12.18□□□□□ -0.46
TNC-212ENST00000542877 LAMB4A4D0S4 1761 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 RPS10-NUDT3A0A1W2PQS6 291 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 TXNL1O43396 289 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 RPS10P46783 165 aaKnown RBP12.17□□□□□ -0.46
TNC-212ENST00000542877 RPS18P62269 152 aaKnown RBP12.17□□□□□ -0.46
TNC-212ENST00000542877 DPY19L2P2Q6ZN68 376 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 MOB3CQ70IA8 216 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 MMP21Q8N119 569 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 OR9K2Q8NGE7 335 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 KCNG3Q8TAE7 436 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 TMEM59Q9BXS4 323 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 ULBP2Q9BZM5 246 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 NRXN3Q9Y4C0 1643 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 FUCA1P04066 466 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 MAOBP27338 520 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 BTG1P62324 171 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 FAM57BQ71RH2 274 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 SLC51BQ86UW2 128 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 FRMD1Q8N878 549 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 SGK3Q96BR1 496 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 RAB3CQ96E17 227 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 TCTN2Q96GX1 697 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 AMDHD1Q96NU7 426 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 TUBB1Q9H4B7 451 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 SDHAF2Q9NX18 166 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 NPFFR2Q9Y5X5 522 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 RAB19A4D1S5 217 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 ITGB2P05107 769 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 PIPP12273 146 aaPredicted RBP12.17□□□□□ -0.46
TNC-212ENST00000542877 ZNF44P15621 663 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 ISL1P61371 349 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 HTR4Q13639 388 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 KCNIP4Q6PIL6 250 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 UPRTQ96BW1 309 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 HHIPL1Q96JK4 782 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 ZNF578Q96N58 590 aaPredicted RBP12.17□□□□□ -0.46
TNC-212ENST00000542877 LIN7BQ9HAP6 207 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 GALNT9Q9HCQ5 603 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 IGLV3-10A0A075B6K4 115 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 MSTNO14793 375 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 SGCEO43556 437 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 PAPLNO95428 1278 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 CHRM4P08173 479 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 POU3F2P20265 443 aaPredicted RBP12.17□□□□□ -0.46
TNC-212ENST00000542877 PCSK6P29122 969 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 TNFRSF4P43489 277 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 CRMP1Q14194 572 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 CD276Q5ZPR3 534 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 GDF7Q7Z4P5 450 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 MISPQ8IVT2 679 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 KLHDC8BQ8IXV7 354 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 RNF141Q8WVD5 230 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 SDSLQ96GA7 329 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 GLIPR2Q9H4G4 154 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 WASH6PQ9NQA3 447 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 DNAJB11Q9UBS4 358 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 CITO14578 2027 aa12.17□□□□□ -0.46
TNC-212ENST00000542877 SOCS6O14544 535 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 OIP5O43482 229 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 SUSD5O60279 629 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 SLCO2B1O94956 709 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 ATP1B1P05026 303 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 TACR3P29371 465 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 S100A11P31949 105 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms