RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 FAM74A1Q5RGS3 127 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PRAMEF19Q5SWL8 479 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 C9orf64Q5T6V5 341 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 HIST2H3PS2Q5TEC6 136 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 DENND1BQ6P3S1 775 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PRSS55Q6UWB4 352 aaPredicted RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CASP12Q6UXS9 341 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 MBOAT1Q6ZNC8 495 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 MOB3CQ70IA8 216 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 ABHD13Q7L211 337 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 TPRA1Q86W33 373 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PUSL1Q8N0Z8 303 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 HSD17B11Q8NBQ5 300 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 OR56B4Q8NH76 319 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 UBA3Q8TBC4 463 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 FAM110BQ8TC76 370 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PAQR8Q8TEZ7 354 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 POF1BQ8WVV4 589 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PIH1D2Q8WWB5 315 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 TFGQ92734 400 aaPredicted RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CORO2AQ92828 525 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 TNFRSF14Q92956 283 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 ISG20Q96AZ6 181 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 C3orf49Q96BT1 292 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 MED8Q96G25 268 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CPB2Q96IY4 423 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 NECTIN4Q96NY8 510 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 GFM1Q96RP9 751 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 VAT1Q99536 393 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SEPHS2Q99611 448 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 MGLLQ99685 303 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 MAP3K3Q99759 626 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 MAPKAP1Q9BPZ7 522 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PCGF1Q9BSM1 259 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 WRAP53Q9BUR4 548 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SNRNP25Q9BV90 132 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 IFT27Q9BW83 186 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 COLEC11Q9BWP8 271 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 OR52A5Q9H2C5 316 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 NXF3Q9H4D5 531 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 RHOJQ9H4E5 214 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 ACTR8Q9H981 624 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 TRPV4Q9HBA0 871 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 IL26Q9NPH9 171 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 TLR8Q9NR97 1041 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SIRT7Q9NRC8 400 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 RNF146Q9NTX7 359 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PRMT7Q9NVM4 692 aaPredicted RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 NDUFB11Q9NX14 153 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 MIOSQ9NXC5 875 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 RASL12Q9NYN1 266 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 TAS2R3Q9NYW6 316 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 LUZP4Q9P127 313 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF629Q9UEG4 869 aaPredicted RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 APOBEC3BQ9UH17 382 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 NDRG2Q9UN36 371 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SLC22A14Q9Y267 594 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PKP3Q9Y446 797 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PCYT1BQ9Y5K3 369 aaPredicted RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 MTCH2Q9Y6C9 303 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 WDR90Q96KV7 1748 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SBF1O95248 1867 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 KIR2DS5A0A0G2JLQ3 304 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 ZCWPW2A0A1B0GU75 182 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 A0A1B0GUH1 482 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 ABHD14A-ACY1A0A1B0GW23 586 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 A0A1W2PQL4 384 aaPredicted RBP5.32□□□□□ -1.56
XRCC4-206ENST00000542685 TMEM72A0PK05 275 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 OR2W5A6NFC9 320 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 NEMP2A6NFY4 417 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 URADA6NGE7 173 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 NCF1BA6NI72 391 aaPredicted RBP5.32□□□□□ -1.56
XRCC4-206ENST00000542685 ANXA2P2A6NMY6 339 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 NCF1CA8MVU1 366 aaPredicted RBP5.32□□□□□ -1.56
XRCC4-206ENST00000542685 MCRIP1C9JLW8 97 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 H7C417 338 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 KIR2DS3K7RE56 304 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 GTPBP1O00178 669 aaKnown RBP5.32□□□□□ -1.56
XRCC4-206ENST00000542685 TXNL1O43396 289 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 CHST10O43529 356 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 AP2A1O95782 977 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 MOCS2O96007 188 aaPredicted RBP5.32□□□□□ -1.56
XRCC4-206ENST00000542685 GUSBP08236 651 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 MMP10P09238 476 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 NR2F1P10589 423 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 RPA2P15927 270 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 MGMTP16455 207 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 GABRB1P18505 474 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 CNR1P21554 472 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 GALP22466 123 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 CYP2F1P24903 491 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 RBMS1P29558 406 aaKnown RBP5.32□□□□□ -1.56
XRCC4-206ENST00000542685 GGT2P36268 569 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 TGFBR1P36897 503 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 RAD52P43351 418 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 CDX1P47902 265 aaPredicted RBP5.32□□□□□ -1.56
XRCC4-206ENST00000542685 PRKXP51817 358 aa5.32□□□□□ -1.56
XRCC4-206ENST00000542685 CTSCP53634 463 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms