RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 DNAJB9Q9UBS3 223 aa8.53□□□□□ -1.04
CHFR-220ENST00000541817 RSL24D1Q9UHA3 163 aaKnown RBP8.53□□□□□ -1.04
CHFR-220ENST00000541817 ZNF639Q9UID6 485 aa8.53□□□□□ -1.04
CHFR-220ENST00000541817 VDAC3Q9Y277 283 aa8.53□□□□□ -1.04
CHFR-220ENST00000541817 SPEF1Q9Y4P9 236 aa8.53□□□□□ -1.04
CHFR-220ENST00000541817 NPIPB8E9PQR5 432 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 H3BSA7 217 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 UGDHO60701 494 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 THRBP10828 461 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 BMP4P12644 408 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 ADRA2CP18825 462 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 DRD5P21918 477 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 IGHV1-2P23083 117 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 IL12BP29460 328 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 APOBEC3AP31941 199 aaPredicted RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 FEN1P39748 380 aaKnown RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 ALDH3A2P51648 485 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 IRF8Q02556 426 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 CHIT1Q13231 466 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 LTB4RQ15722 352 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 HIST2H2ACQ16777 129 aaPredicted RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 SWI5Q1ZZU3 235 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 TRMT12Q53H54 448 aaKnown RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 LRIF1Q5T3J3 769 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 TTC23Q5W5X9 447 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 HIST2H2AA3Q6FI13 130 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 MRM1Q6IN84 353 aaKnown RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 ZNF544Q6NX49 715 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 TMEM108Q6UXF1 575 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 SLC46A3Q7Z3Q1 461 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 ZDHHC13Q8IUH4 622 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 ZCCHC24Q8N2G6 241 aaKnown RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 ZNF540Q8NDQ6 660 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 OR5K1Q8NHB7 308 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 FBXO30Q8TB52 745 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 PNPT1Q8TCS8 783 aaKnown RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 DUSP19Q8WTR2 217 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 TMEM186Q96B77 213 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 RGMAQ96B86 450 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 TESCQ96BS2 214 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 C1GALT1C1Q96EU7 318 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 SUCNR1Q9BXA5 334 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 PITHD1Q9GZP4 211 aaPredicted RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 PAIP1Q9H074 479 aaKnown RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 RBM38Q9H0Z9 239 aaKnown RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 DDX28Q9NUL7 540 aaKnown RBP8.52□□□□□ -1.05
CHFR-220ENST00000541817 ORC6Q9Y5N6 252 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 CEPT1Q9Y6K0 416 aa8.52□□□□□ -1.05
CHFR-220ENST00000541817 TRIM64CA6NLI5 447 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 G3V2T6 193 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 DLGAP1O14490 977 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 NOL3O60936 208 aaKnown RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 RAD51DO75771 328 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 PRSS23O95084 383 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 CBX7O95931 251 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 CST1P01037 141 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 HSD3B1P14060 373 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 CPMP14384 443 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 EPORP19235 508 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 PRPS1L1P21108 318 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 PCMT1P22061 227 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 PTAFRP25105 342 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 HSD3B2P26439 372 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 SHC1P29353 583 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 PPICP45877 212 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 EMDP50402 254 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 ADARB1P78563 741 aaKnown RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 SCGB2A2Q13296 93 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 TOP3AQ13472 1001 aaPredicted RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 PRICKLE4Q2TBC4 344 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 ZBED5Q49AG3 693 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 TIMM23BQ5SRD1 257 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 OTUD3Q5T2D3 398 aaPredicted RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 CCNYL2Q5T2Q4 361 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 AP1ARQ63HQ0 302 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 FRG2Q64ET8 278 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 HBMQ6B0K9 141 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 ERICH5Q6P6B1 374 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 ZCCHC7Q8N3Z6 543 aaKnown RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 KRTCAP2Q8N6L1 136 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 OR4K14Q8NGD5 310 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 OR2V1Q8NHB1 315 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 CLHC1Q8NHS4 586 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 OSTF1Q92882 214 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 HPS1Q92902 700 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 SLC35A4Q96G79 324 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 AURKBQ96GD4 344 aaPredicted RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 METTL2AQ96IZ6 378 aaKnown RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 TSSK3Q96PN8 268 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 FRG2BQ96QU4 278 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 CPPED1Q9BRF8 314 aaPredicted RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 ZNF717Q9BY31 904 aaPredicted RBP8.51□□□□□ -1.05
CHFR-220ENST00000541817 SRXN1Q9BYN0 137 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 MYNNQ9NPC7 610 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 GPRC5BQ9NZH0 403 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 MAT2BQ9NZL9 334 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 MGAT4BQ9UQ53 548 aa8.51□□□□□ -1.05
CHFR-220ENST00000541817 TRBV5-3A0A0A0MS03 114 aa8.5□□□□□ -1.05
CHFR-220ENST00000541817 A0A0A6YYD5 115 aa8.5□□□□□ -1.05
CHFR-220ENST00000541817 IGHV3-15A0A0B4J1V0 119 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms