RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 AKR7A3O95154 331 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 AHSA1O95433 338 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 ALPLP05186 524 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 ANXA8P13928 327 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 ZNF708P17019 499 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 FKBP2P26885 142 aaKnown RBP8.37□□□□□ -1.07
DDX55-208ENST00000541259 GRPRP30550 384 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 GSSP48637 474 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 PTDSS1P48651 473 aaKnown RBP8.37□□□□□ -1.07
DDX55-208ENST00000541259 CLK1P49759 484 aaKnown RBP8.37□□□□□ -1.07
DDX55-208ENST00000541259 DIO1P49895 249 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 PPP2R2BQ00005 443 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 IL1RL1Q01638 556 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 TSPAN31Q12999 210 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 DAG1Q14118 895 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 KRTCAP3Q53RY4 240 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 FAM69AQ5T7M9 428 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 KDM4DQ6B0I6 523 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 HBMQ6B0K9 141 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 PPP4R4Q6NUP7 873 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 KLHL17Q6TDP4 642 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 TMPPEQ6ZT21 453 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 GALNT5Q7Z7M9 940 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 KIF18BQ86Y91 864 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 CDK20Q8IZL9 346 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 OR5M9Q8NGP3 310 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 OR13C2Q8NGS9 318 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 OR51A7Q8NH64 312 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 OR10D3Q8NH80 312 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 OR2V1Q8NHB1 315 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 MFSD8Q8NHS3 518 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 MAGEE2Q8TD90 523 aaPredicted RBP8.37□□□□□ -1.07
DDX55-208ENST00000541259 OSTF1Q92882 214 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 MIB2Q96AX9 1013 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 ZNF845Q96IR2 970 aaPredicted RBP8.37□□□□□ -1.07
DDX55-208ENST00000541259 BBC3Q96PG8 261 aaPredicted RBP8.37□□□□□ -1.07
DDX55-208ENST00000541259 TNFRSF13CQ96RJ3 184 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 SLX1AQ9BQ83 275 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 UCK2Q9BZX2 261 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 KLHL4Q9C0H6 718 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 ENKD1Q9H0I2 346 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 KIF17Q9P2E2 1029 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 REV1Q9UBZ9 1251 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 HDGFL3Q9Y3E1 203 aa8.37□□□□□ -1.07
DDX55-208ENST00000541259 INTS1Q8N201 2190 aaKnown RBP8.37□□□□□ -1.07
DDX55-208ENST00000541259 SMG1Q96Q15 3661 aaKnown RBP8.36□□□□□ -1.07
DDX55-208ENST00000541259 MYO7BQ6PIF6 2116 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 PCNX1Q96RV3 2341 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 IGHV3-15A0A0B4J1V0 119 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 GJE1A6NN92 205 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 KDM4EB2RXH2 506 aaPredicted RBP8.36□□□□□ -1.07
DDX55-208ENST00000541259 MS4A18H0YCH9 400 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 M0R082 166 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 DLGAP1O14490 977 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 OR2T1O43869 369 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 RAMP1O60894 148 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 SOX14O95416 240 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 PMS2P2O95744 297 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 ADAP00813 363 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 IGF2P01344 180 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 ASAH2BP0C7U1 165 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 SAGP10523 405 aaPredicted RBP8.36□□□□□ -1.07
DDX55-208ENST00000541259 CPN1P15169 458 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 ENPP1P22413 925 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 FPR3P25089 353 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 GCKP35557 465 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 IFNGR2P38484 337 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 AQP2P41181 271 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 EIF1AXP47813 144 aaKnown RBP8.36□□□□□ -1.07
DDX55-208ENST00000541259 ALDH3A2P51648 485 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 CARD18P57730 90 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 FXYD6P3P58550 94 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 SNCBQ16143 134 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 BCL2A1Q16548 175 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 MS4A18Q3C1V0 323 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 ZIK1Q3SY52 487 aaPredicted RBP8.36□□□□□ -1.07
DDX55-208ENST00000541259 ZBED5Q49AG3 693 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 EMC4Q5J8M3 183 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 C5orf46Q6UWT4 87 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 ESPNLQ6ZVH7 1005 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 CCDC103Q8IW40 242 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 GHDCQ8N2G8 530 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 KDM8Q8N371 416 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 TMEM99Q8N816 258 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 OR6S1Q8NH40 331 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 MOSPD2Q8NHP6 518 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 ZNF417Q8TAU3 575 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 LIPHQ8WWY8 451 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 ROBO4Q8WZ75 1007 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 SDCCAG3Q96C92 435 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 ZNF587Q96SQ5 575 aaPredicted RBP8.36□□□□□ -1.07
DDX55-208ENST00000541259 RBM4BQ9BQ04 359 aaKnown RBP8.36□□□□□ -1.07
DDX55-208ENST00000541259 TUBA1CQ9BQE3 449 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 RBM4Q9BWF3 364 aaKnown RBP8.36□□□□□ -1.07
DDX55-208ENST00000541259 TAPBPLQ9BX59 468 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 EGLN3Q9H6Z9 239 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 MCCC2Q9HCC0 563 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 NANSQ9NR45 359 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 KRT84Q9NSB2 600 aa8.36□□□□□ -1.07
DDX55-208ENST00000541259 PNPLA3Q9NST1 481 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms