RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 LRP4O75096 1905 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 A0A087WV62 115 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 SHOXO15266 292 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 TPD52L2O43399 206 aaKnown RBP11.46□□□□□ -0.57
RNF4-222ENST00000541204 BRINP1O60477 761 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 SCO1O75880 301 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 SERPINA3P01011 423 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 IGKV1D-16P01601 117 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 IFNA16P05015 189 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 SLC35E2P0CK97 266 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 SULT1A3P0DMM9 295 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 SULT1A4P0DMN0 295 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 DNASE1P24855 282 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 GDNFP39905 211 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 ZP1P60852 638 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 RPS11P62280 158 aaKnown RBP eCLIP11.46□□□□□ -0.57
RNF4-222ENST00000541204 PSG6Q00889 435 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 CDK5R1Q15078 307 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 COL28A1Q2UY09 1125 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 BTN2A1Q7KYR7 527 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 SIX5Q8N196 739 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 FAM98AQ8NCA5 519 aaKnown RBP11.46□□□□□ -0.57
RNF4-222ENST00000541204 SPRTNQ9H040 489 aaPredicted RBP11.46□□□□□ -0.57
RNF4-222ENST00000541204 CAMK2AQ9UQM7 478 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 ABCA7Q8IZY2 2146 aa11.46□□□□□ -0.57
RNF4-222ENST00000541204 TRBV2A0A0J9YWF9 115 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 CIB4A0PJX0 185 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 FOXS1O43638 330 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 FMO6PO60774 539 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 MPC2O95563 127 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 IGLV3-19P01714 112 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 PROS1P07225 676 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 SRFP11831 508 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 HIST1H1CP16403 213 aaKnown RBP11.46□□□□□ -0.58
RNF4-222ENST00000541204 SNTA1Q13424 505 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 FHL1Q13642 323 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 FAM53BQ14153 422 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 WDR45BQ5MNZ6 344 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 RTL4Q6ZR62 310 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 ZNF527Q8NB42 609 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 HGDQ93099 445 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 CTHRC1Q96CG8 243 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 CCDC120Q96HB5 630 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 C20orf85Q9H1P6 137 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 GNG8Q9UK08 70 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 SPATA2Q9UM82 520 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 SATB2Q9UPW6 733 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 TMEM184BQ9Y519 407 aaPredicted RBP11.46□□□□□ -0.58
RNF4-222ENST00000541204 CFAP54Q96N23 3096 aa11.46□□□□□ -0.58
RNF4-222ENST00000541204 A0A0B4J2E0 115 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 IGHV5-51A0A0C4DH38 117 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 A0A1B0GWA3 101 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 A0A1B0GX12 115 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 OGG1O15527 345 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 GMDSO60547 372 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 MYF5P13349 255 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CD38P28907 300 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 PSMB10P40306 273 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 SELENOPP49908 381 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 GBX2P52951 348 aaPredicted RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 SIRPAP78324 504 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CRYZQ08257 329 aaKnown RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 TDGQ13569 410 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 EXOSC2Q13868 293 aaKnown RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 MANEAQ5SRI9 462 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CMTM4Q8IZR5 234 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 OR56B4Q8NH76 319 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CEP76Q8TAP6 659 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 SLC2A12Q8TD20 617 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 SNX33Q8WV41 574 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ZNRF4Q8WWF5 429 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 PIGKQ92643 395 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 NXPE2Q96DL1 559 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 STACQ99469 402 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ZCCHC4Q9H5U6 513 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 LOC105371267A0A1B0GV96 52 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 I3L521 148 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 IFNGP01579 166 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 PDGFAP04085 211 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 UCHL1P09936 223 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 RNH1P13489 461 aaKnown RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 GLULP15104 373 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 S1PR1P21453 382 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 SLC6A6P31641 620 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 RPL6Q02878 288 aaKnown RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 HSF2Q03933 536 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 POU4F2Q12837 409 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ELOCQ15369 112 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ZNHIT3Q15649 155 aaPredicted RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 TMEM255AQ5JRV8 349 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 HES5Q5TA89 166 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 PRAMEF17Q5VTA0 474 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 SLC22A10Q63ZE4 541 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ARHGAP11AQ6P4F7 1023 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ZNF613Q6PF04 617 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 LINGO2Q7L985 606 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 SMIM4Q8WVI0 70 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ZNF559Q9BR84 538 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms