RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 THSD4Q6ZMP0 1018 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 WDR88Q6ZMY6 472 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 Q6ZT83 130 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 C22orf34Q6ZV56 151 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 TSPYL5Q86VY4 417 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-215ENST00000540904 KDM8Q8N371 416 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 C10orf53Q8N6V4 93 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 RNF148Q8N7C7 305 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 CCDC197Q8NCU1 140 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 OR9K2Q8NGE7 335 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF417Q8TAU3 575 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 LZICQ8WZA0 190 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 KISS1RQ969F8 398 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-215ENST00000540904 S100PBPQ96BU1 408 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF587Q96SQ5 575 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-215ENST00000540904 EPYCQ99645 322 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 TMEM43Q9BTV4 400 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 SF3B5Q9BWJ5 86 aaKnown RBP8.17□□□□□ -1.1
SNHG1-215ENST00000540904 HDHD5Q9BXW7 423 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 PCDHAC1Q9H158 963 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF226Q9NYT6 803 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 ABCD2Q9UBJ2 740 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 SEC14L4Q9UDX3 406 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 RASD1Q9Y272 281 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 GPR52Q9Y2T5 361 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 FLVCR1Q9Y5Y0 555 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 FBN2P35556 2912 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 FAM221AA4D161 298 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 LRRN3E7EW58 273 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 KPNA4O00629 521 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 LYZL6O75951 148 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 VAMP5O95183 116 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 LYPD3O95274 346 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 SERPINA1P01009 418 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 NQO1P15559 274 aaKnown RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 PPP3CBP16298 524 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 TCN1P20061 433 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 GRPRP30550 384 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 DNAJA1P31689 397 aaKnown RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 SLC25A3Q00325 362 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 CACNA1DQ01668 2161 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 FAPQ12884 760 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 ITGADQ13349 1161 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 PIN1Q13526 163 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 C1DQ13901 141 aaKnown RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 SFRP5Q5T4F7 317 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 TTC33Q6PID6 262 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 LINC00114Q6XXX2 140 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 FKBP9P1Q75LS8 142 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 H1FNTQ75WM6 255 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 BHLHA15Q7RTS1 189 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 AAED1Q7RTV5 226 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 VTCN1Q7Z7D3 282 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 WFDC8Q8IUA0 241 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 PGAM4Q8N0Y7 254 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 FITM2Q8N6M3 262 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 ZIC4Q8N9L1 334 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 STEAP2Q8NFT2 490 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 NRGNQ92686 78 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 FAM162AQ96A26 154 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 SLC41A3Q96GZ6 507 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 MOGAT1Q96PD6 335 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF385AQ96PM9 386 aaKnown RBP8.16□□□□□ -1.1
SNHG1-215ENST00000540904 PARPBPQ9NWS1 579 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 ASB6Q9NWX5 421 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 EGFL7Q9UHF1 273 aa8.16□□□□□ -1.1
SNHG1-215ENST00000540904 NOTCH2Q04721 2471 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 CENPEQ02224 2701 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 GMNNO75496 209 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 CNOT4O95628 575 aaKnown RBP8.15□□□□□ -1.1
SNHG1-215ENST00000540904 BGLAPP02818 100 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 HRGP04196 525 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 THBDP07204 575 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF43P17038 809 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 GGT1P19440 569 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 CRYGSP22914 178 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 IGHV1-2P23083 117 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 YAP1P46937 504 aaKnown RBP8.15□□□□□ -1.1
SNHG1-215ENST00000540904 MNAT1P51948 309 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 LTBQ06643 244 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 PMS2P3Q13401 168 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 KRT72Q14CN4 511 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 MFSD13AQ14CX5 517 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 STK11Q15831 433 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 SAMD4BQ5PRF9 694 aaKnown RBP8.15□□□□□ -1.1
SNHG1-215ENST00000540904 TSPO2Q5TGU0 170 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 C9orf135Q5VTT2 229 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 GLYATQ6IB77 296 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 C16orf89Q6UX73 402 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 CREB3L2Q70SY1 520 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 CDC20BQ86Y33 519 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 DEFB107AQ8IZN7 70 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 FAM156AQ8NDB6 213 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 OR6S1Q8NH40 331 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 BCAS4Q8TDM0 211 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 TMEM45BQ96B21 275 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 PIK3IP1Q96FE7 263 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 MPP4Q96JB8 637 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 OXGR1Q96P68 337 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 CDRT15Q96T59 188 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms