RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 CCDC134Q9H6E4 229 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 KAT8Q9H7Z6 458 aaKnown RBP10.18□□□□□ -0.78
RTN3-209ENST00000538995 ZNF701Q9NV72 531 aaPredicted RBP10.18□□□□□ -0.78
RTN3-209ENST00000538995 ZNF446Q9NWS9 450 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 SELENONQ9NZV5 590 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 UPB1Q9UBR1 384 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 MGAT4BQ9UQ53 548 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 SLC25A15Q9Y619 301 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 ARID1AO14497 2285 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 TRAV36DV7A0A075B6V5 113 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 A0A0B4J2E0 115 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 A0A1B0GX12 115 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 DPRXA6NFQ7 191 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 BBIP1A8MTZ0 92 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 AIM2O14862 343 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 TPST1O60507 370 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 NPPAP01160 153 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 C8BP07358 591 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 MPGP29372 298 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 AQP1P29972 269 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 PTH2RP49190 550 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 RPS4XP62701 263 aaKnown RBP10.17□□□□□ -0.78
RTN3-209ENST00000538995 CYLC2Q14093 348 aaPredicted RBP10.17□□□□□ -0.78
RTN3-209ENST00000538995 MAPRE2Q15555 327 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 GABRA6Q16445 453 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 GLIPR1L2Q4G1C9 344 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 HSP90B2PQ58FF3 399 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 ALG10BQ5I7T1 473 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 INTS11Q5TA45 600 aaKnown RBP10.17□□□□□ -0.78
RTN3-209ENST00000538995 TSPO2Q5TGU0 170 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 KLHL17Q6TDP4 642 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 TMEM108Q6UXF1 575 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 CREB3L2Q70SY1 520 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 AAED1Q7RTV5 226 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 PATL1Q86TB9 770 aaKnown RBP10.17□□□□□ -0.78
RTN3-209ENST00000538995 GPAT4Q86UL3 456 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 ADPRHL1Q8NDY3 354 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 LILRB1Q8NHL6 650 aaPredicted RBP10.17□□□□□ -0.78
RTN3-209ENST00000538995 SLC47A1Q96FL8 570 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 ZNF385AQ96PM9 386 aaKnown RBP10.17□□□□□ -0.78
RTN3-209ENST00000538995 EPYCQ99645 322 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 SH3GL1Q99961 368 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 TMEM27Q9HBJ8 222 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 MED4Q9NPJ6 270 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 SLC7A10Q9NS82 523 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 FGFR1OP2Q9NVK5 253 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 NPAP1Q9NZP6 1156 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 RCE1Q9Y256 329 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 B3GALT5Q9Y2C3 310 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 AMDHD2Q9Y303 409 aa10.17□□□□□ -0.78
RTN3-209ENST00000538995 MAGED1Q9Y5V3 778 aaPredicted RBP10.17□□□□□ -0.78
RTN3-209ENST00000538995 PRR14LQ5THK1 2151 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 IGKV1D-42A0A075B6H8 117 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 A0A087WUJ7 227 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 SLC22A2O15244 555 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 LGI1O95970 557 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 DANCRP0C864 163 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 PAX7P23759 505 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 PTAFRP25105 342 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 RPS5P46782 204 aaKnown RBP10.16□□□□□ -0.78
RTN3-209ENST00000538995 ARFIP2P53365 341 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 DMTNQ08495 405 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 SELPLGQ14242 412 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 NRF1Q16656 503 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 ZNF613Q6PF04 617 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 BIVMQ86UB2 503 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 ANKK1Q8NFD2 765 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 KBTBD8Q8NFY9 601 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 OR8J3Q8NGG0 315 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 RASSF5Q8WWW0 418 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 KTI12Q96EK9 354 aaPredicted RBP10.16□□□□□ -0.78
RTN3-209ENST00000538995 PERPQ96FX8 193 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 C18orf12Q96KH6 178 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 ZNF317Q96PQ6 595 aaPredicted RBP10.16□□□□□ -0.78
RTN3-209ENST00000538995 ARHGDIGQ99819 225 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 LINC00470Q9BZP3 86 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 GRIP2Q9C0E4 1043 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 OBP2BQ9NPH6 170 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 SLC17A5Q9NRA2 495 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 FAIMQ9NVQ4 179 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 KLHL14Q9P2G3 628 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 CORINQ9Y5Q5 1042 aa10.16□□□□□ -0.78
RTN3-209ENST00000538995 LOC102725191A0A1B0GVB3 256 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 FAM171A2A8MVW0 826 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 SHISA9B4DS77 424 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 ZNF587BE7ETH6 402 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 OVOL3O00110 214 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 FXYD1O00168 92 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 FBP2O00757 339 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 ABCD4O14678 606 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 AKAP8O43823 692 aaKnown RBP10.15□□□□□ -0.78
RTN3-209ENST00000538995 VIMP08670 466 aaKnown RBP10.15□□□□□ -0.78
RTN3-209ENST00000538995 ZNF43P17038 809 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 CDH11P55287 796 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 FOXG1P55316 489 aaPredicted RBP10.15□□□□□ -0.78
RTN3-209ENST00000538995 SH3BGRP55822 239 aaPredicted RBP10.15□□□□□ -0.78
RTN3-209ENST00000538995 KLF10Q13118 480 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 OR1Q1Q15612 314 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 ETFDHQ16134 617 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 CGB2Q6NT52 195 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms