RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 MSANTD3Q96H12 275 aa22.73■■□□□ 1.23
RAB40C-204ENST00000538492 ADOQ96SZ5 270 aa22.73■■□□□ 1.23
RAB40C-204ENST00000538492 NMNAT2Q9BZQ4 307 aa22.73■■□□□ 1.23
RAB40C-204ENST00000538492 PLSCR3Q9NRY6 295 aa22.73■■□□□ 1.23
RAB40C-204ENST00000538492 PAQR5Q9NXK6 330 aaPredicted RBP22.73■■□□□ 1.23
RAB40C-204ENST00000538492 CDC14CA4D256 554 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 UTS2O95399 124 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 F13BP05160 661 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 SRFP11831 508 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 ZNF74Q16587 644 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 RNASE12Q5GAN4 147 aaKnown RBP22.72■■□□□ 1.23
RAB40C-204ENST00000538492 TMEM151BQ8IW70 566 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 TEX19Q8NA77 164 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 TRIM63Q969Q1 353 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 MARVELD1Q9BSK0 173 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 SLC19A3Q9BZV2 496 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 NRSN2Q9GZP1 204 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 AK6Q9Y3D8 172 aaKnown RBP22.72■■□□□ 1.23
RAB40C-204ENST00000538492 SNAP47Q5SQN1 464 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 RPL22L1Q6P5R6 122 aaKnown RBP22.72■■□□□ 1.23
RAB40C-204ENST00000538492 ZNF511Q8NB15 262 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 OR7G1Q8NGA0 311 aa22.72■■□□□ 1.23
RAB40C-204ENST00000538492 PELOQ9BRX2 385 aaKnown RBP22.72■■□□□ 1.23
RAB40C-204ENST00000538492 FITM1A5D6W6 292 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 RHPN2P1A8MT19 583 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 TMEM150CB9EJG8 249 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 SRP9P49458 86 aaKnown RBP22.71■■□□□ 1.23
RAB40C-204ENST00000538492 KRT74Q7RTS7 529 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 ABCG5Q9H222 651 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 BRD7Q9NPI1 651 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 NPFFR2Q9Y5X5 522 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 RP1P56715 2156 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 ALPK2Q86TB3 2170 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 TRAV1-2A0A0B4J238 106 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 A6NL46 340 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 C17orf51A8MQB3 221 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 FLRT2O43155 660 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 ZNF264O43296 627 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 IL33O95760 270 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 EPXP11678 715 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 PPICP45877 212 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 RACK1P63244 317 aaKnown RBP22.71■■□□□ 1.23
RAB40C-204ENST00000538492 EGR4Q05215 589 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 CEP78Q5JTW2 689 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 ESPNLQ6ZVH7 1005 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 RNF170Q96K19 258 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 ALG12Q9BV10 488 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 RTN4RQ9BZR6 473 aa22.71■■□□□ 1.23
RAB40C-204ENST00000538492 MRPS7Q9Y2R9 242 aaKnown RBP22.71■■□□□ 1.23
RAB40C-204ENST00000538492 PRR32B1ATL7 298 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 RGS13O14921 159 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 CPNE3O75131 537 aaKnown RBP22.7■■□□□ 1.22
RAB40C-204ENST00000538492 ARL6IP5O75915 188 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 PNMTP11086 282 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 MAGEB1P43366 347 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 PRR23CQ6ZRP0 262 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 NOXA1Q86UR1 476 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 JAZF1Q86VZ6 243 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 ZNF563Q8TA94 476 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 ZDHHC12Q96GR4 267 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 MMP25Q9NPA2 562 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 UNC13CQ8NB66 2214 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 NOTOA8MTQ0 251 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 ORC5O43913 435 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 GALNSP34059 522 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 CTXN1P60606 82 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 ALG10Q5BKT4 473 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 SLC35D3Q5M8T2 416 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 LINC01590Q5TEZ4 76 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 C17orf82Q86X59 251 aaPredicted RBP22.7■■□□□ 1.22
RAB40C-204ENST00000538492 PRSS58Q8IYP2 241 aa22.7■■□□□ 1.22
RAB40C-204ENST00000538492 LSM14AQ8ND56 463 aaKnown RBP22.7■■□□□ 1.22
RAB40C-204ENST00000538492 INMT-MINDY4F8WBC2 141 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 GLCEO94923 617 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 UCHL1P09936 223 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 RORAP35398 523 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 OR1D5P58170 312 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 UBXN2BQ14CS0 331 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 POMZP3Q6PJE2 187 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 YIPF7Q8N8F6 280 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 KTI12Q96EK9 354 aaPredicted RBP22.69■■□□□ 1.22
RAB40C-204ENST00000538492 GPX7Q96SL4 187 aaPredicted RBP22.69■■□□□ 1.22
RAB40C-204ENST00000538492 HIF3AQ9Y2N7 669 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 RNF215Q9Y6U7 377 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 TP53BP1Q12888 1972 aaPredicted RBP22.69■■□□□ 1.22
RAB40C-204ENST00000538492 A0A087WV48 116 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 OR6C70A6NIJ9 312 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 H7C1C5 153 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 ICOSLGO75144 302 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 ARSBP15848 533 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 AHCYP23526 432 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 ADH7P40394 386 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 LCN6P62502 163 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 RPL6Q02878 288 aaKnown RBP22.69■■□□□ 1.22
RAB40C-204ENST00000538492 LTBQ06643 244 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 C14orf28Q4W4Y0 310 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 ZNF687Q8N1G0 1237 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 C7orf57Q8NEG2 295 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 ZFP3Q96NJ6 502 aa22.69■■□□□ 1.22
RAB40C-204ENST00000538492 SLC46A1Q96NT5 459 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms