RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 DHPSP49366 369 aaPredicted RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 SLC25A1P53007 311 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 CLDN20P56880 219 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 PRPS1P60891 318 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 RPS7P62081 194 aaKnown RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 ACTA2P62736 377 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 RACK1P63244 317 aaKnown RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 ACTG2P63267 376 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 LGALS3BPQ08380 585 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 SKP2Q13309 424 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 CDK5R1Q15078 307 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 ATAD3CQ5T2N8 411 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 LINC01590Q5TEZ4 76 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 WBP2NLQ6ICG8 309 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 SFXN4Q6P4A7 337 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 ARL9Q6T311 187 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 PAMR1Q6UXH9 720 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 FAM122BQ7Z309 247 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 SLC35F2Q8IXU6 374 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 RFLNBQ8N5W9 214 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 C17orf47Q8NEP4 570 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 C1orf216Q8TAB5 229 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 PTPMT1Q8WUK0 201 aaPredicted RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 SLC7A6Q92536 515 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 PIGKQ92643 395 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 RNF31Q96EP0 1072 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 PELI1Q96FA3 418 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 ZNF486Q96H40 463 aaPredicted RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 SPRTNQ9H040 489 aaPredicted RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 MMP28Q9H239 520 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 RNF121Q9H920 327 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 CAPN10Q9HC96 672 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 NEK6Q9HC98 313 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 UBQLN4Q9NRR5 601 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 RBFOX1Q9NWB1 397 aaKnown RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 ZNF221Q9UK13 617 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 LHX6Q9UPM6 363 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 IER3IP1Q9Y5U9 82 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 NPFFR2Q9Y5X5 522 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 A0A1B0GTQ1 180 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 OR2W5A6NFC9 320 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 C17orf105B2RV13 164 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 RGS13O14921 159 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 KHNYNO15037 678 aaKnown RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 TO15178 435 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 GATBO75879 557 aaKnown RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 GLCEO94923 617 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 DDAH2O95865 285 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 SERPINA3P01011 423 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 GYPBP06028 91 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 UCHL1P09936 223 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 PNMTP11086 282 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 SLC2A2P11168 524 aaPredicted RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 UBL4AP11441 157 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 CEACAM1P13688 526 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 SPI1P17947 270 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 NPR2P20594 1047 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 CSRP1P21291 193 aaKnown RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 MST1P26927 711 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 RBMS1P29558 406 aaKnown RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 UQCRC1P31930 480 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 PGDP52209 483 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 HNRNPKP61978 463 aaKnown RBP eCLIP8.43□□□□□ -1.06
DDB1-211ENST00000538280 RPS11P62280 158 aaKnown RBP eCLIP8.43□□□□□ -1.06
DDB1-211ENST00000538280 IFITM2Q01629 132 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 CD226Q15762 336 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 NNATQ16517 81 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 ZNF74Q16587 644 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 CCDC58Q4VC31 144 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 ACSM3Q53FZ2 586 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 ZNF684Q5T5D7 378 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 HACD4Q5VWC8 232 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 RSBN1Q5VWQ0 802 aaPredicted RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 TRIQKQ629K1 86 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 RPL22L1Q6P5R6 122 aaKnown RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 CEACAM19Q7Z692 300 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 Q8N402 240 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 LRRC17Q8N6Y2 441 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 FAM98AQ8NCA5 519 aaKnown RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 NLGN4YQ8NFZ3 816 aaPredicted RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 OR4K13Q8NH42 304 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 ZNF721Q8TF20 911 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 ZNRF4Q8WWF5 429 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 PHYHIPQ92561 330 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 TRIM63Q969Q1 353 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 ADIPOR1Q96A54 375 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 TP53INP1Q96A56 240 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 SMIM19Q96E16 107 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 ZMYND19Q96E35 227 aaPredicted RBP8.43□□□□□ -1.06
DDB1-211ENST00000538280 ZDHHC12Q96GR4 267 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 ART5Q96L15 291 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 TGM7Q96PF1 710 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 SNX18Q96RF0 628 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 LMF1Q96S06 567 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 CUTCQ9NTM9 273 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 COPS3Q9UNS2 423 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 OR10H1Q9Y4A9 318 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 GON4LQ3T8J9 2241 aa8.43□□□□□ -1.06
DDB1-211ENST00000538280 GCN1Q92616 2671 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms