RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 LEG1Q6P5S2 330 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 SLC16A9Q7RTY1 509 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 MAMDC2Q7Z304 686 aaPredicted RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 CEACAM19Q7Z692 300 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 NRARPQ7Z6K4 114 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 BPHLQ86WA6 291 aaPredicted RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 SHISA5Q8N114 240 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 Q8N402 240 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ZNF441Q8N8Z8 693 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ZSCAN1Q8NBB4 408 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 NPEPL1Q8NDH3 523 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 OR6K6Q8NGW6 343 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ABHD4Q8TB40 342 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 RPS4Y2Q8TD47 263 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 STK35Q8TDR2 534 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 THAP4Q8WY91 577 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 TMEM234Q8WY98 164 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 NAT6Q93015 286 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 CCDC74AQ96AQ1 378 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 CLIP3Q96DZ5 547 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ZMYND19Q96E35 227 aaPredicted RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 OMA1Q96E52 524 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 PGLYRP3Q96LB9 341 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ADOQ96SZ5 270 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 SOSTQ9BQB4 213 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 NUDT9Q9BW91 350 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ADAM19Q9H013 955 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 RNF32Q9H0A6 362 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 SLITRK2Q9H156 845 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 TIGARQ9NQ88 270 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 RXFP3Q9NSD7 469 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 RYDENQ9NUL5 291 aaKnown RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 DHCR7Q9UBM7 475 aaKnown RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 GRHPRQ9UBQ7 328 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 C19orf25Q9UFG5 118 aaPredicted RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 ST6GALNAC2Q9UJ37 374 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ZMIZ1Q9ULJ6 1067 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 SZT2Q5T011 3432 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 FER1L5A0AVI2 2057 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 TRBV2A0A0J9YWF9 115 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 TEX13CA0A0J9YWL9 993 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 NOTOA8MTQ0 251 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 A8MUA0 341 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 BLOC1S5-TXNDC5H3BN57 136 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 XKRYO14609 159 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 GNB5O14775 395 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 LRRTM2O43300 516 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 HYAL3O43820 417 aaPredicted RBP6.04□□□□□ -1.44
USP28-206ENST00000538224 OR2T1O43869 369 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 CPNE3O75131 537 aaKnown RBP6.04□□□□□ -1.44
USP28-206ENST00000538224 ITGA10O75578 1167 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 AHSA1O95433 338 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 ONECUT2O95948 504 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 TFP02787 698 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 GYPBP06028 91 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 UCHL1P09936 223 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 CLUP10909 449 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 FOLR1P15328 257 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 NAGAP17050 411 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 EDNRAP25101 427 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 APEX1P27695 318 aaKnown RBP6.04□□□□□ -1.44
USP28-206ENST00000538224 ITPKBP27987 946 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 ABCD3P28288 659 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 TACR3P29371 465 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 EVI2BP34910 448 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 NR0B1P51843 470 aaKnown RBP6.04□□□□□ -1.44
USP28-206ENST00000538224 MAP2K6P52564 334 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 TPTEP56180 551 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 OR12D2P58182 307 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 CTXN1P60606 82 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 ERVK-25P63136 954 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 ZNF117Q03924 483 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 ZP2Q05996 745 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 EGR3Q06889 387 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 COL9A2Q14055 689 aaPredicted RBP6.04□□□□□ -1.44
USP28-206ENST00000538224 SGCBQ16585 318 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 BAK1Q16611 211 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 TP53I3Q53FA7 332 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 ACSM3Q53FZ2 586 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 HSD17B12Q53GQ0 312 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 ZMAT1Q5H9K5 638 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 FAM205BPQ63HN1 556 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 PYHIN1Q6K0P9 492 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 PLET1Q6UQ28 207 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 B3GLCTQ6Y288 498 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 OVCH1Q7RTY7 1134 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 FAM122BQ7Z309 247 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 GRINAQ7Z429 371 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 C9orf40Q8IXQ3 194 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 UBQLNLQ8IYU4 475 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 RDH10Q8IZV5 341 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 SLC25A45Q8N413 288 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 Q8N9G6 341 aaPredicted RBP6.04□□□□□ -1.44
USP28-206ENST00000538224 SCAIQ8N9R8 606 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 LRRC75AQ8NAA5 344 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 GATSQ8NAP1 163 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 IL17RDQ8NFM7 739 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 OR4D9Q8NGE8 314 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 OR8K3Q8NH51 312 aa6.04□□□□□ -1.44
USP28-206ENST00000538224 NUBPLQ8TB37 319 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms