RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SNX3O60493 162 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 TPST1O60507 370 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 FMO6PO60774 539 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 RAMP1O60894 148 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 ADAP00813 363 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 GPIP06744 558 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 SOD3P08294 240 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 IDUAP35475 653 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 ARFIP2P53365 341 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 OR2B6P58173 313 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 EGR4Q05215 589 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 FBXW9Q5XUX1 488 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 FAM91A1Q658Y4 838 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 CCDC121Q6ZUS5 278 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 COMTD1Q86VU5 262 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 CCDC103Q8IW40 242 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 ZIC4Q8N9L1 334 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 C11orf65Q8NCR3 313 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 OR6S1Q8NH40 331 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 MFSD8Q8NHS3 518 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 DNAJA4Q8WW22 397 aaPredicted RBP10.97□□□□□ -0.65
PRKDC-207ENST00000536483 NEUROG1Q92886 237 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 KISS1RQ969F8 398 aaPredicted RBP10.97□□□□□ -0.65
PRKDC-207ENST00000536483 TRMT61AQ96FX7 289 aaKnown RBP10.97□□□□□ -0.65
PRKDC-207ENST00000536483 REG4Q9BYZ8 158 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 TRIM2Q9C040 744 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 AMBRA1Q9C0C7 1298 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 PARPBPQ9NWS1 579 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 KLHL14Q9P2G3 628 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.97□□□□□ -0.65
PRKDC-207ENST00000536483 RNF115Q9Y4L5 304 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 FLVCR1Q9Y5Y0 555 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 CHD3Q12873 2000 aaKnown RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 LOC102725191A0A1B0GVB3 256 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 BBIP1A8MTZ0 92 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 FXYD1O00168 92 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 LGI1O95970 557 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 CD3EP07766 207 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 DANCRP0C864 163 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 PNMTP11086 282 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 CCNA2P20248 432 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 HTR2AP28223 471 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 CDKN1AP38936 164 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 KLF10Q13118 480 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 CEACAM7Q14002 265 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 TAB1Q15750 504 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 TRMT5Q32P41 509 aaKnown RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 TIMM23BQ5SRD1 257 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 NCMAPQ5T1S8 102 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 SWT1Q5T5J6 900 aaKnown RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 C1orf140Q5VVS0 124 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 CCDC80Q76M96 950 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 CALHM3Q86XJ0 350 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 ZNF433Q8N7K0 673 aaPredicted RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 OR8J3Q8NGG0 315 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 SMAP2Q8WU79 429 aaPredicted RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 SLC38A4Q969I6 547 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 FBXW5Q969U6 566 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 GTPBP3Q969Y2 492 aaKnown RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 MUS81Q96NY9 551 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 SH3GL1Q99961 368 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 PTDSS2Q9BVG9 487 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 TESQ9UGI8 421 aaKnown RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 PRSS50Q9UI38 385 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 ANGPT4Q9Y264 503 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 SLC9A8Q9Y2E8 581 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 ARL2BPQ9Y2Y0 163 aa10.96□□□□□ -0.65
PRKDC-207ENST00000536483 NOSIPQ9Y314 301 aaKnown RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 MAGED1Q9Y5V3 778 aaPredicted RBP10.96□□□□□ -0.65
PRKDC-207ENST00000536483 FREM1Q5H8C1 2179 aa10.96□□□□□ -0.66
PRKDC-207ENST00000536483 CADP27708 2225 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 A0A087WUJ7 227 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 A0A1B0GWA3 101 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 CCT8L1PA6NM43 557 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 FRS3O43559 492 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 OR2T1O43869 369 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 TPST2O60704 377 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 MRPL33O75394 65 aaKnown RBP10.95□□□□□ -0.66
PRKDC-207ENST00000536483 IGHV1-2P23083 117 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 IL32P24001 234 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 PCGF2P35227 344 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 ACVR1BP36896 505 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 NFYCQ13952 458 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 CYLC2Q14093 348 aaPredicted RBP10.95□□□□□ -0.66
PRKDC-207ENST00000536483 SELPLGQ14242 412 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 MAPRE2Q15555 327 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 ETFDHQ16134 617 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 NANOGP8Q6NSW7 305 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 ULK3Q6PHR2 472 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 LINC00114Q6XXX2 140 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 BHLHA15Q7RTS1 189 aaPredicted RBP10.95□□□□□ -0.66
PRKDC-207ENST00000536483 PATL1Q86TB9 770 aaKnown RBP10.95□□□□□ -0.66
PRKDC-207ENST00000536483 ARMC8Q8IUR7 673 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 ZNF100Q8IYN0 542 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 CADM2Q8N3J6 435 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 TMEM99Q8N816 258 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 APH1AQ96BI3 265 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 ZNF775Q96BV0 537 aaPredicted RBP10.95□□□□□ -0.66
PRKDC-207ENST00000536483 LRRC58Q96CX6 371 aa10.95□□□□□ -0.66
PRKDC-207ENST00000536483 PCDHAC1Q9H158 963 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms