RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 CA1P00915 261 aaPredicted RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 JCHAINP01591 159 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 IGHG4P01861 327 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 CD5P06127 495 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 HBQ1P09105 142 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 TROVE2P10155 538 aaKnown RBP eCLIP2.41□□□□□ -2.02
VBP1-203ENST00000535916 BCKDHAP12694 445 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 HTR1FP30939 366 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 CASP14P31944 242 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 ATP5C1P36542 298 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 RPL4P36578 427 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 EPS15P42566 896 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 CRYBB2P43320 205 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 CD151P48509 253 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 EMDP50402 254 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 RAB9AP51151 201 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 ATP1B3P54709 279 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 CLDN8P56748 225 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 RPS6P62753 249 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 RPS15P62841 145 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 OGDHQ02218 1023 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 BDH1Q02338 343 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 OC90Q02509 493 aaPredicted RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 BCL2L1Q07817 233 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 RIPPLY1Q0D2K3 151 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 RAB35Q15286 201 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 STK11Q15831 433 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 SLC5A12Q1EHB4 618 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 ZNF630Q2M218 657 aaPredicted RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 ALKBH6Q3KRA9 238 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 NKAIN1Q4KMZ8 207 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 C1orf220Q5T0J3 134 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 PIP5KL1Q5T9C9 394 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 RNASEKQ6P5S7 137 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 LUZP2Q86TE4 346 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 TMEM17Q86X19 198 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 LINC01561Q8N1V8 128 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 LYPD1Q8N2G4 141 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 PDCL2Q8N4E4 241 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 COMMD1Q8N668 190 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 FAM83FQ8NEG4 500 aaPredicted RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 CNIH3Q8TBE1 160 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 AENQ8WTP8 325 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 ELMO1Q92556 727 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 ISG20Q96AZ6 181 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 DNAJA3Q96EY1 480 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 SLC35E1Q96K37 410 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 C12orf42Q96LP6 360 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 TGS1Q96RS0 853 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 COPS8Q99627 209 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 CITED1Q99966 193 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 NARFLQ9H6Q4 476 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 TDRD3Q9H7E2 651 aaKnown RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 SUDS3Q9H7L9 328 aaPredicted RBP2.41□□□□□ -2.02
VBP1-203ENST00000535916 VCPKMTQ9H867 229 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 SLC17A5Q9NRA2 495 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 NECAP2Q9NVZ3 263 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 IL36GQ9NZH8 169 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 SCML2Q9UQR0 700 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 TRAF3IP3Q9Y228 551 aa2.41□□□□□ -2.02
VBP1-203ENST00000535916 NINLQ9Y2I6 1382 aa2.4□□□□□ -2.02
VBP1-203ENST00000535916 TRAV25A0A0B4J276 109 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 LINC00854A0A1B0GVQ3 168 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 NDUFS8O00217 210 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 RNF113AO15541 343 aaKnown RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 TRIM3O75382 744 aaPredicted RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 GAPDHP04406 335 aaKnown RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 CRYGCP07315 174 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 H2AFZP0C0S5 128 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 RHOXF2BP0C7M4 288 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 HSMCR30P0CW71 290 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 CPN2P22792 545 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 GABRR1P24046 479 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 HOXD10P28358 340 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 OTX1P32242 354 aaPredicted RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 FDFT1P37268 417 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 NAMPTP43490 491 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 NOVA1P51513 510 aaKnown RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 HADHBP55084 474 aaKnown RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 CDH6P55285 790 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 C21orf59P57076 290 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 PLP1P60201 277 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 DMTNQ08495 405 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 KLRB1Q12918 225 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 EIF2B1Q14232 305 aaKnown RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 MICBQ29980 383 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 SLC25A52Q3SY17 297 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 TIGITQ495A1 244 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 TP53I3Q53FA7 332 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 FAM120AOSQ5T036 256 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 DCST2Q5T1A1 773 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 BEND3Q5T5X7 828 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 SLX4IPQ5VYV7 408 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 ACSM5Q6NUN0 579 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 UQCC3Q6UW78 93 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 TMEM107Q6UX40 140 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 HSD17B13Q7Z5P4 300 aaPredicted RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 SCD5Q86SK9 330 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 TGIF2LXQ8IUE1 241 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 KATNAL2Q8IYT4 538 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms