RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 AQP12BA6NM10 295 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 ZNF716A6NP11 495 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 CLDN1O95832 211 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 FABP3P05413 133 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 YES1P07947 543 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 ITGA2P17301 1181 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 CBLP22681 906 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 GRPRP30550 384 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 AGTR1P30556 359 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 CTBP2P56545 445 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.69
CHD4-203ENST00000535717 TRAM2Q15035 370 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 SLC25A35Q3KQZ1 300 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 OTUD3Q5T2D3 398 aaPredicted RBP10.74□□□□□ -0.69
CHD4-203ENST00000535717 EEF1A1P5Q5VTE0 462 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 PIWIL3Q7Z3Z3 882 aaKnown RBP10.74□□□□□ -0.69
CHD4-203ENST00000535717 BTLAQ7Z6A9 289 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 ZDHHC21Q8IVQ6 265 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 TUSC5Q8IXB3 177 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 AQP12AQ8IXF9 295 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 ADGRG5Q8IZF4 528 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 C10orf53Q8N6V4 93 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 PFN4Q8NHR9 129 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 PIGXQ8TBF5 258 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 POP5Q969H6 163 aaKnown RBP10.74□□□□□ -0.69
CHD4-203ENST00000535717 ZNF775Q96BV0 537 aaPredicted RBP10.74□□□□□ -0.69
CHD4-203ENST00000535717 HS6ST2Q96MM7 605 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 PSMG3-AS1Q96PY0 264 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 PIP5K1AQ99755 562 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 MAGIXQ9H6Y5 334 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 BCO1Q9HAY6 547 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 GP6Q9HCN6 339 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 KLHL9Q9P2J3 617 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 EMC9Q9Y3B6 208 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 CACNA1CQ13936 2221 aa10.74□□□□□ -0.69
CHD4-203ENST00000535717 CENPEQ02224 2701 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 ICE1Q9Y2F5 2266 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 IGKV3D-15A0A087WSY6 115 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 A0A1W2PRQ8 180 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 A1L4Q6 167 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 ZNF724A8MTY0 619 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 M0R082 166 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 PIP5K1CO60331 668 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 CH25HO95992 272 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 CGAP01215 116 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 MT-ND1P03886 318 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 H1F0P07305 194 aaKnown RBP10.73□□□□□ -0.69
CHD4-203ENST00000535717 MAGEA2P43356 314 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 SLC16A1P53985 500 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 DGCR6Q14129 220 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 SLC17A1Q14916 467 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 PDK3Q15120 406 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 ZNF74Q16587 644 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 FAM98BQ52LJ0 330 aaKnown RBP10.73□□□□□ -0.69
CHD4-203ENST00000535717 TMEM201Q5SNT2 666 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 H1FNTQ75WM6 255 aaPredicted RBP10.73□□□□□ -0.69
CHD4-203ENST00000535717 SLC46A3Q7Z3Q1 461 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 NUFIP2Q7Z417 695 aaKnown RBP10.73□□□□□ -0.69
CHD4-203ENST00000535717 SPATA24Q86W54 205 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 LRRC17Q8N6Y2 441 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 OR6K3Q8NGY3 331 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 ZNF417Q8TAU3 575 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 ACOT11Q8WXI4 607 aaPredicted RBP10.73□□□□□ -0.69
CHD4-203ENST00000535717 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
CHD4-203ENST00000535717 DHRS1Q96LJ7 313 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 ZNF587Q96SQ5 575 aaPredicted RBP10.73□□□□□ -0.69
CHD4-203ENST00000535717 PIGMQ9H3S5 423 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 ANKRD19PQ9H560 264 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 CHST11Q9NPF2 352 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 KCNJ16Q9NPI9 418 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 C20orf141Q9NUB4 165 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 JKAMPQ9P055 326 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 MED31Q9Y3C7 131 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 TESMINQ9Y4I5 508 aa10.73□□□□□ -0.69
CHD4-203ENST00000535717 A0A087WUU8 490 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 TRBV4-1A0A0J9YWV2 114 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 TCRBV3S1A0A5B6 114 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 DHRS12A0PJE2 317 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 ENO4A6NNW6 628 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 EEF1E1-BLOC1S5C9J1V9 151 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 EEF1E1O43324 174 aaKnown RBP10.72□□□□□ -0.69
CHD4-203ENST00000535717 MGRN1O60291 552 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 SMNDC1O75940 238 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHD4-203ENST00000535717 MT-ATP6P00846 226 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 IGF2P01344 180 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 GTF2E2P29084 291 aaKnown RBP10.72□□□□□ -0.69
CHD4-203ENST00000535717 ERFP50548 548 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 SPIBQ01892 262 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 CHRNB3Q05901 458 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 TFF3Q07654 80 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 MFSD13AQ14CX5 517 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 FGD3Q5JSP0 725 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 TMEM225Q6GV28 225 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 PODNL1Q6PEZ8 512 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 TBPL2Q6SJ96 375 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 MAMDC2Q7Z304 686 aaPredicted RBP10.72□□□□□ -0.69
CHD4-203ENST00000535717 GPAT4Q86UL3 456 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 KDM8Q8N371 416 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 SCAIQ8N9R8 606 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 OR52J3Q8NH60 311 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms