RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, human

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP4A-208	ENST00000534106	MTBP	Q96DY7	904 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	DNAJA3	Q96EY1	480 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	CMTM7	Q96FZ5	175 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	RNF145	Q96MT1	663 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	DOK1	Q99704	481 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	GATA5	Q9BWX5	397 aa	Predicted RBP	2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	SUCNR1	Q9BXA5	334 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	TSGA10	Q9BZW7	698 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	TINAGL1	Q9GZM7	467 aa	Predicted RBP	2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	ROGDI	Q9GZN7	287 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	SLITRK2	Q9H156	845 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	MMP27	Q9H306	513 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	TPK1	Q9H3S4	243 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	PPCS	Q9HAB8	311 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	PLAC1	Q9HBJ0	212 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	ZBTB26	Q9HCK0	441 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	FANCF	Q9NPI8	374 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	G6PC2	Q9NQR9	355 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	ABHD10	Q9NUJ1	306 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	LYAR	Q9NX58	379 aa	Known RBP	2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	TAS2R13	Q9NYV9	303 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	RNF14	Q9UBS8	474 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF69	Q9UC07	566 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	CES1P1	Q9UKY3	287 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	GRIP1	Q9Y3R0	1128 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	LRP12	Q9Y561	859 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	SNX8	Q9Y5X2	465 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	FKBP7	Q9Y680	259 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	HERC1	Q15751	4861 aa		2.54	□□□□□ -2
CHMP4A-208	ENST00000534106	LOC102723971	A0A1B0GUV8	181 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	MDFIC2	A0A1B0GVS7	189 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106		A0A1W2PRB8	838 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	CIB4	A0PJX0	185 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	GXYLT2	A0PJZ3	443 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	SYNDIG1L	A6NDD5	238 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	AQP7P3	A6NL99	342 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	PRR23D1	E9PI22	279 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	NR5A2	O00482	541 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ACOX3	O15254	700 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ATP8B1	O43520	1251 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	STK16	O75716	305 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	UTS2	O95399	124 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	TTC4	O95801	387 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ANGPTL1	O95841	491 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	PNP	P00491	289 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ITGA5	P08648	1049 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	NPS	P0C0P6	89 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	PRR23D2	P0DMB1	279 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	CDH2	P19022	906 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	BTF3	P20290	206 aa	Known RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	IL12B	P29460	328 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	GCH1	P30793	250 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	EVI2B	P34910	448 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	THBS4	P35443	961 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	CETN2	P41208	172 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	OR3A2	P47893	321 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	IDH3G	P51553	393 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	MNAT1	P51948	309 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	RAP1GDS1	P52306	607 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	LOXL3	P58215	753 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	TAS2R39	P59534	338 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	RAB10	P61026	200 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	SNRPD2	P62316	118 aa	Known RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	TUBA1B	P68363	451 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	IL1RL1	Q01638	556 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	TBX2	Q13207	712 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	BLMH	Q13867	455 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	EFR3A	Q14156	821 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	OR4D1	Q15615	310 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	TOMM34	Q15785	309 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	GABRA6	Q16445	453 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF239	Q16600	458 aa	Known RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	PDK4	Q16654	411 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	HIST2H2AC	Q16777	129 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	GLYR1	Q49A26	553 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	C4orf46	Q504U0	113 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	HIKESHI	Q53FT3	197 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	SGO1	Q5FBB7	561 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	KLF17	Q5JT82	389 aa	Predicted RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ELFN2	Q5R3F8	820 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	HIST2H2AA3	Q6FI13	130 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	MED27	Q6P2C8	311 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	MZT2A	Q6P582	158 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	KLHL17	Q6TDP4	642 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	CYP20A1	Q6UW02	462 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106		Q6ZT83	130 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	TUBA1A	Q71U36	451 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	GSTA5	Q7RTV2	222 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	LRRC70	Q7Z2Q7	622 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	EXOC3L1	Q86VI1	746 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	LAS2	Q8IYD9	372 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF100	Q8IYN0	542 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	CDK20	Q8IZL9	346 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ZCCHC7	Q8N3Z6	543 aa	Known RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	ANKRD42	Q8N9B4	389 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	SRFBP1	Q8NEF9	429 aa	Known RBP	2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	OR9A2	Q8NGT5	310 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	OR4C3	Q8NH37	302 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	RNF128	Q8TEB7	428 aa		2.53	□□□□□ -2
CHMP4A-208	ENST00000534106	WDR60	Q8WVS4	1066 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms