RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SHQ1Q6PI26 577 aaKnown RBP10.81□□□□□ -0.68
CAPN1-223ENST00000533079 RBM15BQ8NDT2 890 aaKnown RBP10.81□□□□□ -0.68
CAPN1-223ENST00000533079 NUP37Q8NFH4 326 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 MOAP1Q96BY2 351 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 ZNF524Q96C55 264 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 C3orf30Q96M34 536 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 QRSL1Q9H0R6 528 aaKnown RBP10.81□□□□□ -0.68
CAPN1-223ENST00000533079 ZNF442Q9H7R0 627 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 EFCAB1Q9HAE3 211 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 SDR39U1Q9NRG7 319 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-223ENST00000533079 SLC7A10Q9NS82 523 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 SIRT3Q9NTG7 399 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-223ENST00000533079 ACER3Q9NUN7 267 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 C1orf109Q9NX04 203 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 PCDHB10Q9UN67 800 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 FAF1Q9UNN5 650 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-223ENST00000533079 TMED5Q9Y3A6 229 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 SPEF1Q9Y4P9 236 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 CCL27Q9Y4X3 112 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 DYSFO75923 2080 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
CAPN1-223ENST00000533079 IGHV1-18A0A0C4DH31 117 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 A0A0G2JK05 382 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 SKAP2O75563 359 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-223ENST00000533079 AK1P00568 194 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 IDO1P14902 403 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 SDC1P18827 310 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 NTF4P34130 210 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 RPL3P39023 403 aaKnown RBP10.8□□□□□ -0.68
CAPN1-223ENST00000533079 RNF144AP50876 292 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-223ENST00000533079 FOXG1P55316 489 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-223ENST00000533079 H3F3AP84243 136 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 POU3F1Q03052 451 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-223ENST00000533079 EMX2Q04743 252 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 COQ5Q5HYK3 327 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 PDZK1Q5T2W1 519 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 C10orf67Q8IYJ2 551 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 POMGNT2Q8NAT1 580 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 OR4F15Q8NGB8 312 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 PSMA8Q8TAA3 256 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 WDR60Q8WVS4 1066 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 TMEM45BQ96B21 275 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 PPP3R2Q96LZ3 170 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 THUMPD3Q9BV44 507 aaKnown RBP10.8□□□□□ -0.68
CAPN1-223ENST00000533079 CRNNQ9UBG3 495 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-223ENST00000533079 TRAPPC4Q9Y296 219 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 GRIP1Q9Y3R0 1128 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 FLVCR1Q9Y5Y0 555 aa10.8□□□□□ -0.68
CAPN1-223ENST00000533079 ARFGEF3Q5TH69 2177 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 VSTM5A8MXK1 200 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 CSTAP01040 98 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 TFP02787 698 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 LINC00032P0C843 101 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 TFPIP10646 304 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 IFNGR1P15260 489 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 PGM1P36871 562 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 HPCAL1P37235 193 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 STX1BP61266 288 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 MAD2L1Q13257 205 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-223ENST00000533079 ZNF141Q15928 474 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 TSPO2Q5TGU0 170 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 C9orf135Q5VTT2 229 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 PGM2L1Q6PCE3 622 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 HACD2Q6Y1H2 254 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 GRINAQ7Z429 371 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 PEG10Q86TG7 708 aaKnown RBP10.79□□□□□ -0.68
CAPN1-223ENST00000533079 DDIASQ8IXT1 998 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 NATD1Q8N6N6 113 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 FAM169BQ8N8A8 192 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 FAM71CQ8NEG0 241 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 SFXN5Q8TD22 340 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 MCUR1Q96AQ8 359 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 TMEM186Q96B77 213 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 TUBGCP3Q96CW5 907 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 TSSK3Q96PN8 268 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 GPATCH2Q9NW75 528 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 ASIC5Q9NY37 505 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 PRPF19Q9UMS4 504 aaKnown RBP10.79□□□□□ -0.68
CAPN1-223ENST00000533079 USP22Q9UPT9 525 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 FIS1Q9Y3D6 152 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 GPR45Q9Y5Y3 372 aa10.79□□□□□ -0.68
CAPN1-223ENST00000533079 PKD1L1Q8TDX9 2849 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 ARPC4-TTLL3A0A0A6YYG9 625 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 LOC100653049A0A140TA62 436 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 BBIP1A8MTZ0 92 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 hCG_2039718K7EN88 272 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 AKAP10O43572 662 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 KRT34O76011 436 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 ALDOCP09972 364 aaKnown RBP10.78□□□□□ -0.68
CAPN1-223ENST00000533079 CCT3P49368 545 aaKnown RBP10.78□□□□□ -0.68
CAPN1-223ENST00000533079 NAAAQ02083 359 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 TP53BP2Q13625 1128 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 CCNIQ14094 377 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 SLC17A1Q14916 467 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 ATP6AP1LQ52LC2 224 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 PDCD4Q53EL6 469 aaKnown RBP10.78□□□□□ -0.68
CAPN1-223ENST00000533079 AWAT1Q58HT5 328 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 C6orf136Q5SQH8 315 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 SHISA2Q6UWI4 295 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 C16orf89Q6UX73 402 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms