RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 NANOGNBQ7Z5D8 188 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 ZNF511Q8NB15 262 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 NEIL3Q8TAT5 605 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 SEMA4CQ9C0C4 833 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 ADAM19Q9H013 955 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 ABCB9Q9NP78 766 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 GSTK1Q9Y2Q3 226 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 ASPMQ8IZT6 3477 aa13.81□□□□□ -0.2
SRPRA-206ENST00000532259 LINC00854A0A1B0GVQ3 168 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 A0A1W2PPK0 400 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 PMS2P1A4D2B8 440 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 NTN3O00634 580 aaPredicted RBP13.8□□□□□ -0.2
SRPRA-206ENST00000532259 RNF13O43567 381 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 SLC25A12O75746 678 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 GPANK1O95872 356 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 GP1BBP13224 206 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 SPI1P17947 270 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 RPS27P42677 84 aaKnown RBP13.8□□□□□ -0.2
SRPRA-206ENST00000532259 PON3Q15166 354 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 BMPERQ8N8U9 685 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 HTRA1Q92743 480 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 PPIL3Q9H2H8 161 aaKnown RBP13.8□□□□□ -0.2
SRPRA-206ENST00000532259 FAIMQ9NVQ4 179 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 MED11Q9P086 117 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 PLEKHB1Q9UF11 243 aaPredicted RBP13.8□□□□□ -0.2
SRPRA-206ENST00000532259 LOC110117498-PIK3R3F6TDL0 507 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 DCTN6O00399 190 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 UPK1BO75841 260 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 PRPS1P60891 318 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 TMEM91Q6ZNR0 172 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 CPEB2Q7Z5Q1 589 aaKnown RBP13.8□□□□□ -0.2
SRPRA-206ENST00000532259 JAZF1Q86VZ6 243 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 LYSMD2Q8IV50 215 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 KDM8Q8N371 416 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 ARIH2OSQ8N7S6 290 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 SLC30A2Q9BRI3 323 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 TMEM43Q9BTV4 400 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 SLC19A3Q9BZV2 496 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 TRIM36Q9NQ86 728 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 COMMD3Q9UBI1 195 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 COPS3Q9UNS2 423 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 A3GALT2U3KPV4 340 aa13.8□□□□□ -0.2
SRPRA-206ENST00000532259 KNTC1P50748 2209 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 AHCTF1Q8WYP5 2266 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 CACNA1HO95180 2353 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 RALGAPA1Q6GYQ0 2036 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 A0A1W2PRG6 482 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 OR6C76A6NM76 312 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 YKT6O15498 198 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 MT-ND5P03915 603 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 HLA-DPB1P04440 258 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 HIST1H2ABP04908 130 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 ASAH2BP0C7U1 165 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 PGCP20142 388 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 PSMB10P40306 273 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 CBFBQ13951 182 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 INPP5JQ15735 1006 aaPredicted RBP13.79□□□□□ -0.2
SRPRA-206ENST00000532259 HIST3H2AQ7L7L0 130 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.79□□□□□ -0.2
SRPRA-206ENST00000532259 ASB15Q8WXK1 588 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 HIST1H2ACQ93077 130 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 CNN2Q99439 309 aaKnown RBP13.79□□□□□ -0.2
SRPRA-206ENST00000532259 ISYNA1Q9NPH2 558 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 CRNNQ9UBG3 495 aaPredicted RBP13.79□□□□□ -0.2
SRPRA-206ENST00000532259 ZNF229Q9UJW7 825 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 HIF3AQ9Y2N7 669 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 PCDHGB6Q9Y5F9 930 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 TVP23AA6NH52 213 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 SUSD5O60279 629 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 CPNE3O75131 537 aaKnown RBP13.79□□□□□ -0.2
SRPRA-206ENST00000532259 OR2J2O76002 312 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 IL1AP01583 271 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 OPN1LWP04000 364 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 SLC6A8P48029 635 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 MRPL14Q6P1L8 145 aaKnown RBP13.79□□□□□ -0.2
SRPRA-206ENST00000532259 POC5Q8NA72 575 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 MR1Q95460 341 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 DDOQ99489 341 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 GRHPRQ9UBQ7 328 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 MALT1Q9UDY8 824 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 KLHL21Q9UJP4 597 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 GNG8Q9UK08 70 aa13.79□□□□□ -0.2
SRPRA-206ENST00000532259 TMED7-TICAM2A0A0A6YYA0 188 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 TRDV1A0A1B0GX56 115 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 TMEM72A0PK05 275 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 OR6C70A6NIJ9 312 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 CD14P08571 375 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 SP9P0CG40 484 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 IL11P20809 199 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 MPLP40238 635 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 P2RX1P51575 399 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 ZFP36L1Q07352 338 aaKnown RBP13.78□□□□□ -0.2
SRPRA-206ENST00000532259 OXA1LQ15070 435 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 CD200R1LQ6Q8B3 271 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 ARSKQ6UWY0 536 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 SLC35F2Q8IXU6 374 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 OR8H2Q8N162 312 aa13.78□□□□□ -0.2
SRPRA-206ENST00000532259 LRRC75AQ8NAA5 344 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms