RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TACO1Q9BSH4 297 aaKnown RBP12.89□□□□□ -0.35
CPSF1-206ENST00000531480 FUZQ9BT04 418 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 DENND2DQ9H6A0 471 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-206ENST00000531480 FANCFQ9NPI8 374 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 MEPEQ9NQ76 525 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-206ENST00000531480 KLHL9Q9P2J3 617 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 IGHV3-15A0A0B4J1V0 119 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 RAMP1O60894 148 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 CLDN1O95832 211 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 MT-ATP6P00846 226 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 MT-ND1P03886 318 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 YES1P07947 543 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 CD8BP10966 210 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 ITGA2P17301 1181 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 AGTR1P30556 359 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 IFNA8P32881 189 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 OR2B6P58173 313 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 KPNB1Q14974 876 aaKnown RBP12.88□□□□□ -0.35
CPSF1-206ENST00000531480 POU4F3Q15319 338 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 OR7A5Q15622 319 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 TTC33Q6PID6 262 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-206ENST00000531480 TMEM99Q8N816 258 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 SCAIQ8N9R8 606 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 OR6K3Q8NGY3 331 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 CA5BP1Q8WTZ4 195 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 TMEM255BQ8WV15 326 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 TMEM239Q8WW34 195 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 UTP4Q969X6 686 aaKnown RBP12.88□□□□□ -0.35
CPSF1-206ENST00000531480 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-206ENST00000531480 SF3B5Q9BWJ5 86 aaKnown RBP12.88□□□□□ -0.35
CPSF1-206ENST00000531480 TAPBPLQ9BX59 468 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 PRRG4Q9BZD6 226 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 PIGMQ9H3S5 423 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 NMNAT1Q9HAN9 279 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-206ENST00000531480 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 B3GALT5Q9Y2C3 310 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 CORINQ9Y5Q5 1042 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 FREM1Q5H8C1 2179 aa12.88□□□□□ -0.35
CPSF1-206ENST00000531480 TCRBV3S1A0A5B6 114 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 MSTNO14793 375 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 AKR7A3O95154 331 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 VAMP5O95183 116 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 FABP3P05413 133 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 TSPAN19P0C672 248 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 BMP5P22003 454 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 YAP1P46937 504 aaKnown RBP12.87□□□□□ -0.35
CPSF1-206ENST00000531480 UGT2B15P54855 530 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 RASGEF1BQ0VAM2 473 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 TRAM2Q15035 370 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 SNCBQ16143 134 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 ZNF74Q16587 644 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 FAM98BQ52LJ0 330 aaKnown RBP12.87□□□□□ -0.35
CPSF1-206ENST00000531480 VWA1Q6PCB0 445 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 NHLRC1Q6VVB1 395 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 MAMDC2Q7Z304 686 aaPredicted RBP12.87□□□□□ -0.35
CPSF1-206ENST00000531480 SLC46A3Q7Z3Q1 461 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 BTLAQ7Z6A9 289 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 CYP4Z1Q86W10 505 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 P3H2Q8IVL5 708 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 CCDC103Q8IW40 242 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 TUSC5Q8IXB3 177 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 ADGRG5Q8IZF4 528 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 RNF113BQ8IZP6 322 aaKnown RBP12.87□□□□□ -0.35
CPSF1-206ENST00000531480 DNAJA3Q96EY1 480 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 MOGAT1Q96PD6 335 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 PIP5K1AQ99755 562 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 FKRPQ9H9S5 495 aa12.87□□□□□ -0.35
CPSF1-206ENST00000531480 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
CPSF1-206ENST00000531480 PLEKHB1Q9UF11 243 aaPredicted RBP12.87□□□□□ -0.35
CPSF1-206ENST00000531480 A0A087WUU8 490 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 A8MXE2 369 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 hCG_2039718K7EN88 272 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 HNRNPRO43390 633 aaKnown RBP12.86□□□□□ -0.35
CPSF1-206ENST00000531480 ASAH2BP0C7U1 165 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 IGFBP2P18065 325 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 HMGA2P52926 109 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 CTBP2P56545 445 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 OTUD3Q5T2D3 398 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-206ENST00000531480 H1FNTQ75WM6 255 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-206ENST00000531480 ZDHHC21Q8IVQ6 265 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 ZIC4Q8N9L1 334 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 SLC7A13Q8TCU3 470 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 ACOT11Q8WXI4 607 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-206ENST00000531480 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 UCK2Q9BZX2 261 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 KLHL4Q9C0H6 718 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 CHST11Q9NPF2 352 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 B3GAT1Q9P2W7 334 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 RHCGQ9UBD6 479 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 ZNF229Q9UJW7 825 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 RASD1Q9Y272 281 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 EMC9Q9Y3B6 208 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 FAM32AQ9Y421 112 aaKnown RBP12.86□□□□□ -0.35
CPSF1-206ENST00000531480 V9GYQ6 96 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 NBPF19A0A087WUL8 3843 aa12.86□□□□□ -0.35
CPSF1-206ENST00000531480 MS4A18H0YCH9 400 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms