RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 NUFIP1Q9UHK0 495 aaKnown RBP5.11□□□□□ -1.59
CD44-231ENST00000531110 DNPEPQ9ULA0 475 aa5.11□□□□□ -1.59
CD44-231ENST00000531110 RNF24Q9Y225 148 aa5.11□□□□□ -1.59
CD44-231ENST00000531110 CCL27Q9Y4X3 112 aa5.11□□□□□ -1.59
CD44-231ENST00000531110 NPTNQ9Y639 398 aa5.11□□□□□ -1.59
CD44-231ENST00000531110 V9GYS6 101 aa5.11□□□□□ -1.59
CD44-231ENST00000531110 SLIT1O75093 1534 aa5.11□□□□□ -1.59
CD44-231ENST00000531110 SETBP1Q9Y6X0 1596 aa5.11□□□□□ -1.59
CD44-231ENST00000531110 TMEM272A0A1B0GTI8 110 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 MEX3AA1L020 520 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 GJE1A6NN92 205 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ERI2A8K979 691 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 C17orf100A8MU93 164 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 TMX2-CTNND1H3BSU7 103 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RPL36A-HNRNPH2H7BZ11 118 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 DLGAP1O14490 977 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 SMAD9O15198 467 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 XPNPEP2O43895 674 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 HBP1O60381 514 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 OR10H3O60404 316 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 SRPX2O60687 465 aaPredicted RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 RDH16O75452 317 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 OR4F21O95013 312 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 SCGB1D1O95968 90 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RPLP0P05388 317 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 CRYBA1P05813 215 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 NMBP08949 121 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 HOXB5P09067 269 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 HOXC6P09630 235 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 OR52Z1P0C646 297 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RGPD1P0DJD0 1748 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 GIMD1P0DJR0 217 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 CALCBP10092 127 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ANXA3P12429 323 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 LYL1P12980 280 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 UNGP13051 313 aaPredicted RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 GTF2F2P13984 249 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 FOLR1P15328 257 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ATP6V1B2P21281 511 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 TBXA2RP21731 343 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RPS3P23396 243 aaKnown RBP eCLIP5.1□□□□□ -1.59
CD44-231ENST00000531110 NR2F2P24468 414 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 IVDP26440 423 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 S100A2P29034 98 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RPA3P35244 121 aaPredicted RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 PSMB10P40306 273 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 P2RY2P41231 377 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 MTNR1AP48039 350 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 PPOXP50336 477 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 TNFSF10P50591 281 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RGS8P57771 180 aaPredicted RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 DNAJB13P59910 316 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 KRTAP10-11P60412 298 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 SNRPEP62304 92 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 PPP3R1P63098 170 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 PMP22Q01453 160 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 TNFRSF17Q02223 184 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 EMX1Q04741 257 aaPredicted RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 MAPK11Q15759 364 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 NEDD8Q15843 81 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ATP6V1FQ16864 119 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 IMPG1Q17R60 797 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ADPRMQ3LIE5 342 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 TIMM50Q3ZCQ8 353 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 MPPE1Q53F39 396 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 TMEM268Q5VZI3 342 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 OR4F3Q6IEY1 312 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ETFRF1Q6IPR1 90 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 PARM1Q6UWI2 310 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ARMCX2Q7L311 632 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 NDUFAF7Q7L592 441 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 PID1Q7Z2X4 250 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ANKRD33Q7Z3H0 272 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RNF144BQ7Z419 303 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 UNC93AQ86WB7 457 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 PAQR7Q86WK9 346 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 ZNF573Q86YE8 665 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 PDZD9Q8IXQ8 264 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 TMEM217Q8N7C4 229 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 C4orf32Q8N8J7 132 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 OR8J3Q8NGG0 315 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 OR10A6Q8NH74 314 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RORBQ92753 470 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 C3orf30Q96M34 536 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 C12orf66Q96MD2 445 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 MCCC1Q96RQ3 725 aaPredicted RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 GAD1Q99259 594 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 MTERF1Q99551 399 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 LPAR4Q99677 370 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 CMKLR1Q99788 373 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 TMEM47Q9BQJ4 181 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 PIGQQ9BRB3 760 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 FEM1AQ9BSK4 669 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 THUMPD3Q9BV44 507 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 POLDIP3Q9BY77 421 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 IL25Q9H293 177 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 RGCCQ9H4X1 137 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 DHX35Q9H5Z1 703 aaKnown RBP5.1□□□□□ -1.59
CD44-231ENST00000531110 AUNIPQ9H7T9 357 aa5.1□□□□□ -1.59
CD44-231ENST00000531110 LPAR2Q9HBW0 351 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms