RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 C12orf57Q99622 126 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 MICU1Q9BPX6 476 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 MCOLN1Q9GZU1 580 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 MOB1AQ9H8S9 216 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 THAP10Q9P2Z0 257 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-221ENST00000529873 PGAP2Q9UHJ9 254 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 TMEM269A0A1B0GVZ9 245 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 SERINC4A6NH21 518 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 CYB5BO43169 146 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 MRPL33O75394 65 aaKnown RBP7.9□□□□□ -1.14
CTNND1-221ENST00000529873 UTS2O95399 124 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 GAAP10253 952 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 IMPA1P29218 277 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 CX3CR1P49238 355 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 LIMK1P53667 647 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 CLDN17P56750 224 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 ERVFC1P60507 584 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 KCNJ10P78508 379 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 MPEG1Q2M385 716 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 SULF2Q8IWU5 870 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 OR13C2Q8NGS9 318 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 PIGCQ92535 297 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 ZNF566Q969W8 418 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 FOXN4Q96NZ1 517 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 ULBP2Q9BZM5 246 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 ZNF286AQ9HBT8 521 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 CCL26Q9Y258 94 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 HS3ST3A1Q9Y663 406 aa7.9□□□□□ -1.14
CTNND1-221ENST00000529873 TRAV36DV7A0A075B6V5 113 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 RPS10-NUDT3A0A1W2PQS6 291 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 CLDN24A6NM45 220 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 TO15178 435 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 GPR39O43194 453 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 SPDEFO95238 335 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 IL1AP01583 271 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 DBHP09172 617 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 ABOP16442 354 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 RPS10P46783 165 aaKnown RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 DBPQ10586 325 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 TBCEQ15813 527 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 LRRC26Q2I0M4 334 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 EXOSC6Q5RKV6 272 aaKnown RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 ZNF684Q5T5D7 378 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 IL20RBQ6UXL0 311 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 CREB3L2Q70SY1 520 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 CLEC14AQ86T13 490 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 HAS2Q92819 552 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 MIB2Q96AX9 1013 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 UTP23Q9BRU9 249 aaKnown RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 TGIF2Q9GZN2 237 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 GAREM1Q9H706 876 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 NOX3Q9HBY0 568 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 KCNIP2Q9NS61 270 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 TXNL4BQ9NX01 149 aaKnown RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 NXT1Q9UKK6 140 aaKnown RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 PCDHB10Q9UN67 800 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 SIT1Q9Y3P8 196 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 HCFC2Q9Y5Z7 792 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 TMEM212A6NML5 194 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 PPP6CO00743 305 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 NCR1O76036 304 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 FURINP09958 794 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 RAB40ALP0C0E4 278 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 UBBP0CG47 229 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 UBCP0CG48 685 aaKnown RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 PRPH2P23942 346 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 OR1D4P47884 311 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 RPS27AP62979 156 aaKnown RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 UBA52P62987 128 aaKnown RBP7.9□□□□□ -1.15
CTNND1-221ENST00000529873 TRNP1Q6NT89 227 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 OR1J2Q8NGS2 313 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 RAB40AQ8WXH6 277 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 NUDT22Q9BRQ3 303 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 SEMA4GQ9NTN9 838 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 PISDQ9UG56 409 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 MMACHCQ9Y4U1 282 aa7.9□□□□□ -1.15
CTNND1-221ENST00000529873 PRAMEF27A3QJZ7 478 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 KDM4EB2RXH2 506 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-221ENST00000529873 DVL2O14641 736 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 GABRA5P31644 462 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 MMP12P39900 470 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 SNRPD2P62316 118 aaKnown RBP7.89□□□□□ -1.15
CTNND1-221ENST00000529873 PRAMEF9Q5VWM5 478 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 NOXA1Q86UR1 476 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 L3MBTL4Q8NA19 623 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 NT5C3BQ969T7 300 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 ZBTB8AQ96BR9 441 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 TM4SF18Q96CE8 201 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 PIGQQ9BRB3 760 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 IER2Q9BTL4 223 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 HIF1ANQ9NWT6 349 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 RASD1Q9Y272 281 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 ZNF593O00488 134 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-221ENST00000529873 OPN1LWP04000 364 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 CRHBPP24387 322 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 ETV6P41212 452 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 HTR5AP47898 357 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 DAPP51397 102 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 RRADP55042 308 aa7.89□□□□□ -1.15
CTNND1-221ENST00000529873 KIAA1024LP59773 190 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms